RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TMEM74Q96NL1 305 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 NSUN5Q96P11 429 aaKnown RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 ZDHHC6Q9H6R6 413 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 CCNB1IP1Q9NPC3 277 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 PTGFRNQ9P2B2 879 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 EVLQ9UI08 416 aaPredicted RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 ST14Q9Y5Y6 855 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 SF3B1O75533 1304 aaKnown RBP eCLIP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 SAGE2PA6NJ88 616 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 RGS10O43665 173 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 URODP06132 367 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 AQP1P29972 269 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 CORO1AP31146 461 aaKnown RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 MTHFRP42898 656 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 RAB15P59190 212 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 PFKPQ01813 784 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 RABL3Q5HYI8 236 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 LRRC73Q5JTD7 316 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 CDC73Q6P1J9 531 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 BHLHB9Q6PI77 547 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF534Q76KX8 674 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 KRT77Q7Z794 578 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 RBM12BQ8IXT5 1001 aaKnown RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 SHKBP1Q8TBC3 707 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 OR52E6Q96RD3 313 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 SORT1Q99523 831 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 ADGRE2Q9UHX3 823 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 SSR3Q9UNL2 185 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 MAGEB3O15480 346 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 SLC7A4O43246 635 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 DUSP11O75319 330 aaKnown RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 DHFRP00374 187 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 ARSAP15289 507 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 ELAVL2Q12926 359 aaKnown RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 RASAL3Q86YV0 1011 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 CENPNQ96H22 339 aaPredicted RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 CLEC4AQ9UMR7 237 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 FCF1Q9Y324 198 aaKnown RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 I3L521 148 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 EI24O14681 340 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 EPHB3P54753 998 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 ATP6V0D1P61421 351 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 CCNYL2Q5T2Q4 361 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 CYP4Z2PQ8N1L4 340 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 OR2T12Q8NG77 320 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 OR10Q1Q8NGQ4 319 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 C12orf43Q96C57 262 aaKnown RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 HAPLN3Q96S86 360 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 IPPKQ9H8X2 491 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 MCUBQ9NWR8 336 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 CNOT6Q9ULM6 557 aaKnown RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 OAZ3Q9UMX2 235 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 PDE10AQ9Y233 779 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 DNAJC25-GNG10A0A024R161 153 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 SLC25A14O95258 325 aaPredicted RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF182P17025 639 aaPredicted RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 TYMPP19971 482 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 IGFBP6P24592 240 aaPredicted RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 RCVRNP35243 200 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 MAD2L1Q13257 205 aaPredicted RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 ARHGEF6Q15052 776 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 TLR1Q15399 786 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 SYT16Q17RD7 645 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 AGMOQ6ZNB7 445 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 SYT12Q8IV01 421 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 OR8H3Q8N146 312 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 GPR156Q8NFN8 814 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 MCOLN3Q8TDD5 553 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 MZB1Q8WU39 189 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 HOPXQ9BPY8 73 aaPredicted RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 SOX17Q9H6I2 414 aaPredicted RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 NMUR1Q9HB89 426 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 NFKBIL1Q9UBC1 381 aaPredicted RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 SDHDO14521 159 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 NDUFS2O75306 463 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 RNASEH2AO75792 299 aaKnown RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 DGKQP52824 942 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 ZCCHC8Q6NZY4 707 aaKnown RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 PHC2Q8IXK0 858 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 OR10T2Q8NGX3 314 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 POF1BQ8WVV4 589 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 UROC1Q96N76 676 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 TSPAN18Q96SJ8 248 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 TNKS2Q9H2K2 1166 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 CLN6Q9NWW5 311 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 MARCH4Q9P2E8 410 aaPredicted RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 DNAJB4Q9UDY4 337 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 ENOPH1Q9UHY7 261 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 TMED5Q9Y3A6 229 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 CAPN14A8MX76 684 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 G3V2L1 256 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 FBP2O00757 339 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 CPNE3O75131 537 aaKnown RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 JUNP05412 331 aaKnown RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 PABPC1P11940 636 aaKnown RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 IMPDH1P20839 514 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 ITPKAP23677 461 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 DGKAP23743 735 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms