RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 IGHV1OR21-1A0A087WYE8 117 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 ZCWPW2A0A1B0GU75 182 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 C17orf113A0A1B0GUU1 675 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 A8MU76 341 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 C1QTNF9BB2RNN3 333 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 LIN7AO14910 233 aaPredicted RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 B4GAT1O43505 415 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 SGTAO43765 313 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 NIPSNAP2O75323 286 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 RASSF9O75901 435 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 UBXN7O94888 489 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 CPNE6O95741 557 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 TTC4O95801 387 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 MPOP05164 745 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 PROS1P07225 676 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 GSTM1P09488 218 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 C1QTNF9P0C862 333 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 JMJD7P0C870 316 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 ERVK-10P10266 1014 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 BRAFP15056 766 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 XRCC1P18887 633 aaPredicted RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 PSMA3P25788 255 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 IVDP26440 423 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 ARNTP27540 789 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 SLC19A1P41440 591 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 SLC1A2P43004 574 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 MAGEA3P43357 314 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 GPR3P46089 330 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 FASLGP48023 281 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 CARSP49589 748 aaKnown RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 GABREP78334 506 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 GPLD1P80108 840 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 SHC2P98077 582 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 MPP1Q00013 466 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 GUCY2DQ02846 1103 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 GSTM4Q03013 218 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 TUBB2AQ13885 445 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 ISXQ2M1V0 245 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 ARMC3Q5W041 872 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 METRNLQ641Q3 311 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 IRGCQ6NXR0 463 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 ABRAXAS1Q6UWZ7 409 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 UNQ6494/PRO21346Q6UXR6 183 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 CCNI2Q6ZMN8 369 aaPredicted RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 UNC5AQ6ZN44 842 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 TMEM26Q6ZUK4 368 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 OTOAQ7RTW8 1153 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 ZNF438Q7Z4V0 828 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 B3GNT8Q7Z7M8 397 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 LRRC6Q86X45 466 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 C17orf82Q86X59 251 aaPredicted RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 FAM129CQ86XR2 697 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 CILP2Q8IUL8 1156 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 PALM2Q8IXS6 379 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 RBM12BQ8IXT5 1001 aaKnown RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 AGGF1Q8N302 714 aaeCLIP6.39□□□□□ -1.39
CD44-204ENST00000279452 DCBLD1Q8N8Z6 715 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 RCBTB1Q8NDN9 531 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 LKAAEAR1Q8TD35 194 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 PYROXD1Q8WU10 500 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 IFT81Q8WYA0 676 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 NXPE2Q96DL1 559 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 CERS2Q96G23 380 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 SGSM3Q96HU1 749 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 SIGLEC10Q96LC7 697 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 LINC00615Q96LM1 132 aaPredicted RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 CCDC74BQ96LY2 380 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 RMDN2Q96LZ7 410 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 TGM7Q96PF1 710 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 INSM2Q96T92 566 aaPredicted RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 NUDT22Q9BRQ3 303 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 NAT9Q9BTE0 207 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 LRRC1Q9BTT6 524 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 TUBB2BQ9BVA1 445 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 CARD6Q9BX69 1037 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 INTS10Q9NVR2 710 aaKnown RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 WHRNQ9P202 907 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 ZNF624Q9P2J8 865 aaPredicted RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 TXNDC16Q9P2K2 825 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 SATB2Q9UPW6 733 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 ASF1AQ9Y294 204 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 TDRKHQ9Y2W6 561 aaKnown RBP6.39□□□□□ -1.39
CD44-204ENST00000279452 HEBP2Q9Y5Z4 205 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 FAM169AQ9Y6X4 670 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 COLEC10Q9Y6Z7 277 aa6.39□□□□□ -1.39
CD44-204ENST00000279452 PI4KAP42356 2102 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 GON4LQ3T8J9 2241 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 CCDC187A0A096LP49 1063 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 GSAPA4D1B5 854 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 TRABD2BA6NFA1 517 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 LILRA5A6NI73 299 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 H3BMM5 538 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 NTN3O00634 580 aaPredicted RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 KPNA5O15131 536 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 VPS26AO75436 327 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 ESR1P03372 595 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 HGFP14210 728 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 PKMP14618 531 aaKnown RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 SAT1P21673 171 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms