RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 GNAZP19086 355 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 GSTM3P21266 225 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SLC15A1P46059 708 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SMARCB1Q12824 385 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 GXYLT1Q4G148 440 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 PRAMEF18Q5VWM3 479 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SLC25A25Q6KCM7 469 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SLC30A6Q6NXT4 461 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SAMD7Q7Z3H4 446 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 TMEM110Q86TL2 294 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 NATD1Q8N6N6 113 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 TRPM4Q8TD43 1214 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ELMO3Q96BJ8 720 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ACO2Q99798 780 aaKnown RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ZNF471Q9BX82 626 aaPredicted RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 OSBPL7Q9BZF2 842 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SDCBP2Q9H190 292 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 C11orf16Q9NQ32 467 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 CNOT6Q9ULM6 557 aaKnown RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 IQSEC2Q5JU85 1478 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SRPRAP08240 638 aaKnown RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 TACSTD2P09758 323 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 APLP1P51693 650 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 TXNL4AP83876 142 aaKnown RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SMU1Q2TAY7 513 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 TPRG1LQ5T0D9 272 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 KLHDC10Q6PID8 442 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 CYP2W1Q8TAV3 490 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 EIF2B3Q9NR50 452 aaKnown RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 CNTN6Q9UQ52 1028 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 REXO2Q9Y3B8 237 aaKnown RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 UGT1A9O60656 530 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 NDST3O95803 873 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 LGALS2P05162 132 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 UGT1A6P19224 532 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 UGT1A1P22309 533 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 UGT1A4P22310 534 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 UGT1A3P35503 534 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SPAM1P38567 509 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 RPL7AP62424 266 aaKnown RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 CSTF1Q05048 431 aaKnown RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 GTF2H2Q13888 395 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SPATS1Q496A3 300 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 HSD17B12Q53GQ0 312 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 GTF2H2CQ6P1K8 395 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ZFAND2BQ8WV99 257 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 DCAKDQ8WVC6 231 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 OR8D1Q8WZ84 308 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 HIPK3Q9H422 1215 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 UGT1A7Q9HAW7 530 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 UGT1A10Q9HAW8 530 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 UGT1A8Q9HAW9 530 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 KIAA1522Q9P206 1035 aaPredicted RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 TCAF1Q9Y4C2 921 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 MAP4K5Q9Y4K4 846 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 TLX3O43711 291 aaPredicted RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ITPKAP23677 461 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 CCDC28AQ8IWP9 274 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 OR10H4Q8NGA5 316 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SEC14L1Q92503 715 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ZNF350Q9GZX5 532 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 CDT1Q9H211 546 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 NRXN1Q9ULB1 1477 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ZNF823P16415 610 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 CSTF2P33240 577 aaKnown RBP eCLIP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 GRM5P41594 1212 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 FOXM1Q08050 763 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ADAM15Q13444 863 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 NOL9Q5SY16 702 aaKnown RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 PAOXQ6QHF9 649 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ZFPM1Q8IX07 1006 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 HDDC3Q8N4P3 179 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ZNF431Q8TF32 576 aaPredicted RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SPOCK2Q92563 424 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 RHBDF1Q96CC6 855 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ASB9Q96DX5 294 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 GJD4Q96KN9 370 aaPredicted RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 AP1S3Q96PC3 154 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 KXD1Q9BQD3 176 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 C1orf109Q9NX04 203 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 TESMINQ9Y4I5 508 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 PCDHGB2Q9Y5G2 931 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 WASF2Q9Y6W5 498 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 HECW2Q9P2P5 1572 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 NRCAMQ92823 1304 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 DDTLA6NHG4 134 aaPredicted RBP8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 OR6C75A6NL08 312 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 ELFN1P0C7U0 828 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 KLRK1P26718 216 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 PIK3CBP42338 1070 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 ZNF829Q3KNS6 432 aaPredicted RBP8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 DRICH1Q6PGQ1 229 aaPredicted RBP8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 AMIGO1Q86WK6 493 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 MCEMP1Q8IX19 187 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 CADM2Q8N3J6 435 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 BANPQ8N9N5 519 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 OR52J3Q8NH60 311 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 SOCS4Q8WXH5 440 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 CSPG4P5Q96PW8 444 aa8.59□□□□□ -1.03
SCUBE3-201ENST00000274938 GAD1Q99259 594 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms