RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 FAM92BQ6ZTR7 304 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 SLITRK4Q8IW52 837 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 DCAKDQ8WVC6 231 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 HERVK_113Q902F9 699 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 MECRQ9BV79 373 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ACKR2O00590 384 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 NARSO43776 548 aaKnown RBP11.25□□□□□ -0.61
PTPN4-201ENST00000263708 IFNW1P05000 195 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 GNAO1P09471 354 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 DUSP4Q13115 394 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 TIGD2Q4W5G0 525 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 EIPR1Q53HC9 387 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 CHST9Q7L1S5 443 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ZBTB8BQ8NAP8 495 aaPredicted RBP11.25□□□□□ -0.61
PTPN4-201ENST00000263708 OR7D4Q8NG98 312 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 HM13Q8TCT9 377 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 DUS2Q9NX74 493 aaKnown RBP11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ADM5C9JUS6 153 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ORC5O43913 435 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 STOMP27105 288 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 LACTB2Q53H82 288 aaPredicted RBP11.25□□□□□ -0.61
PTPN4-201ENST00000263708 SHC3Q92529 594 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 TBL1XR1Q9BZK7 514 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 AP1M2Q9Y6Q5 423 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 TRPM1Q7Z4N2 1603 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ATP5A1P25705 553 aaKnown RBP11.25□□□□□ -0.61
PTPN4-201ENST00000263708 CYP2C18P33260 490 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 DSG2Q14126 1118 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ARSHQ5FYA8 562 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ZNF311Q5JNZ3 666 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 AADACL2Q6P093 401 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 LAPTM4BQ86VI4 370 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 OTUB2Q96DC9 234 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ABCG2Q9UNQ0 655 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 AK5Q9Y6K8 562 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 PIAS1O75925 651 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 CCNE2O96020 404 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 CRTC2Q53ET0 693 aaPredicted RBP11.25□□□□□ -0.61
PTPN4-201ENST00000263708 PLA2G12BQ9BX93 195 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 SERINC1Q9NRX5 453 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 RAP2CQ9Y3L5 183 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 LGALS2P05162 132 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 UGT2B4P06133 528 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 MAGEA11P43364 429 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 ATP6V0D1P61421 351 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 SPATA19Q7Z5L4 167 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 SETD7Q8WTS6 366 aaKnown RBP11.24□□□□□ -0.61
PTPN4-201ENST00000263708 GPATCH1Q9BRR8 931 aaKnown RBP11.24□□□□□ -0.61
PTPN4-201ENST00000263708 SNX15Q9NRS6 342 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 PPP1R14DQ9NXH3 145 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 TEX13CA0A0J9YWL9 993 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 ENPP3O14638 875 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 CYP3A4P08684 503 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 RBM34P42696 430 aaKnown RBP11.24□□□□□ -0.61
PTPN4-201ENST00000263708 LAPTM5Q13571 262 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 ITGA7Q13683 1181 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 CDCA5Q96FF9 252 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 OSBPL2Q9H1P3 480 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 TAS2R7Q9NYW3 318 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 A0A1B0GVC2 190 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 SIGLEC16A6NMB1 481 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 HOXC6P09630 235 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 CYP27C1Q4G0S4 372 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 C6orf52Q5T4I8 152 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 NOXRED1Q6NXP6 359 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 MOXD1Q6UVY6 613 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 BORCS5Q969J3 196 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 ATXN10Q9UBB4 475 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 CLCA3PQ9Y6N3 262 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 IQSEC2Q5JU85 1478 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 TLR5O60602 858 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 MSCO60682 206 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 FGF1P05230 155 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 SELENOVP59797 346 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 EIF5AP63241 154 aaKnown RBP11.24□□□□□ -0.61
PTPN4-201ENST00000263708 ANKRD46Q86W74 232 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 NETO2Q8NC67 525 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 SMARCD2Q92925 531 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 LRRC46Q96FV0 321 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 TRIM36Q9NQ86 728 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 GSKIPQ9P0R6 139 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 SLC31A1O15431 190 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 CLDN9O95484 217 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 SERPINA6P08185 405 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 CHRM5P08912 532 aaPredicted RBP11.24□□□□□ -0.61
PTPN4-201ENST00000263708 AGXTP21549 392 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 KLRK1P26718 216 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 KIR3DL1P43629 444 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 GNPDA1P46926 289 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 USP4Q13107 963 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 TSGA10IPQ3SY00 556 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 SLC38A4Q969I6 547 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 DNAJC18Q9H819 358 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 KLRF1Q9NZS2 232 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 AP4B1Q9Y6B7 739 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 A8MU76 341 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 CXCR1P25024 350 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 BNIP3Q12983 259 aa11.24□□□□□ -0.61
PTPN4-201ENST00000263708 CA9Q16790 459 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms