RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 INSIG1O15503 277 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 ADAM12O43184 909 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 MGAT3Q09327 533 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 SIM2Q14190 667 aaPredicted RBP8.99□□□□□ -0.97
MSH4-201ENST00000263187 NR1D2Q14995 579 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 CPSF6Q16630 551 aaKnown RBP eCLIP8.99□□□□□ -0.97
MSH4-201ENST00000263187 PARP15Q460N3 678 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 LRRC73Q5JTD7 316 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 RNF219Q5W0B1 726 aaPredicted RBP8.99□□□□□ -0.97
MSH4-201ENST00000263187 ANKRD26P1Q6NSI1 321 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 GOLGA7Q7Z5G4 137 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 ZDHHC13Q8IUH4 622 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 BBS5Q8N3I7 341 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 CNIH3Q8TBE1 160 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 LKAAEAR1Q8TD35 194 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 TRIB2Q92519 343 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 PLEKHA8Q96JA3 519 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 RHNO1Q9BSD3 238 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 GPR63Q9BZJ6 419 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 CIPCQ9C0C6 399 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 EPS8L2Q9H6S3 715 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 TBC1D23Q9NUY8 699 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 INTS10Q9NVR2 710 aaKnown RBP8.99□□□□□ -0.97
MSH4-201ENST00000263187 NLE1Q9NVX2 485 aaPredicted RBP8.99□□□□□ -0.97
MSH4-201ENST00000263187 PCDHB8Q9UN66 801 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 ST14Q9Y5Y6 855 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 SH3PXD2BA1X283 911 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 WASH4PA8MWX3 477 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 DUSP11O75319 330 aaKnown RBP8.99□□□□□ -0.97
MSH4-201ENST00000263187 SEC22BO75396 215 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 INMTO95050 263 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 THRBP10828 461 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 CCNA2P20248 432 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 CCND3P30281 292 aaPredicted RBP8.99□□□□□ -0.97
MSH4-201ENST00000263187 NFATC3Q12968 1075 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 CCNYL2Q5T2Q4 361 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 PTRHD1Q6GMV3 140 aaKnown RBP8.99□□□□□ -0.97
MSH4-201ENST00000263187 AFTPHQ6ULP2 937 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 TMEM179BQ7Z7N9 219 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 ZNF554Q86TJ5 538 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 SMYD1Q8NB12 490 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 OR2T12Q8NG77 320 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 ACDQ96AP0 544 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 ASB2Q96Q27 587 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 LATS2Q9NRM7 1088 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 RIC8BQ9NVN3 520 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 PCDHB3Q9Y5E6 796 aa8.99□□□□□ -0.97
MSH4-201ENST00000263187 FAM234BA2RU67 622 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 MYO1GB0I1T2 1018 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 NBNO60934 754 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 ZNF623O75123 536 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 RHOCP08134 193 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 OCM2P0CE71 109 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 OCMP0CE72 109 aaPredicted RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 LPOP22079 712 aaPredicted RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 SLC26A3P40879 764 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 GTF2H2Q13888 395 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 GTF2H3Q13889 308 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 PHKG1Q16816 387 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 CTU2Q2VPK5 515 aaKnown RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 AASDHQ4L235 1098 aaPredicted RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 ACBD5Q5T8D3 534 aaPredicted RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 GTF2H2CQ6P1K8 395 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 DET1Q7L5Y6 550 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 SPATA19Q7Z5L4 167 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 RBM23Q86U06 439 aaKnown RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 ZFAND4Q86XD8 727 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 CARNMT1Q8N4J0 409 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 PNPT1Q8TCS8 783 aaKnown RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 SLC22A17Q8WUG5 538 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 OSCP1Q8WVF1 389 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 HHIPL1Q96JK4 782 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 TRIB3Q96RU7 358 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 BARD1Q99728 777 aaKnown RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 BEGAINQ9BUH8 593 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 SPC25Q9HBM1 224 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 HPS4Q9NQG7 708 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 MRGBPQ9NV56 204 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 SEPT3Q9UH03 358 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 PKP3Q9Y446 797 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 VCANP13611 3396 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 ANKRD66B4E2M5 251 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 UPK1AO00322 258 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 OR7A17O14581 309 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 CAPN15O75808 1086 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 ZNF682O95780 498 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 MLYCDO95822 493 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 BCL10O95999 233 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 KLKB1P03952 638 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 ANXA6P08133 673 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 FCGR1AP12314 374 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 PFKLP17858 780 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 MZF1P28698 734 aaPredicted RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 TPP2P29144 1249 aaPredicted RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 HOXC8P31273 242 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 TGFBR1P36897 503 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 CASP9P55211 416 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 ADARB1P78563 741 aaKnown RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 FAM189BP81408 668 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 EMX2Q04743 252 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms