RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 S100A3P33764 101 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 SELENBP1Q13228 472 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 TIGD6Q17RP2 521 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 TBRG1Q3YBR2 411 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 ZNF605Q86T29 641 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 CIR1Q86X95 450 aaPredicted RBP12.16□□□□□ -0.46
USP30-201ENST00000257548 CELF2-AS1Q8N7Q2 184 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 DNERQ8NFT8 737 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 DNAJB3Q8WWF6 145 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 KHSRPQ92945 711 aaKnown RBP eCLIP12.16□□□□□ -0.466e-8■■□□□ 13.9
USP30-201ENST00000257548 UBE2FQ969M7 185 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 LINGO1Q96FE5 620 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 TUBA1CQ9BQE3 449 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 UCKL1Q9NWZ5 548 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 PCDH10Q9P2E7 1040 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 ARFGEF1Q9Y6D6 1849 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 PRMT5O14744 637 aaPredicted RBP12.16□□□□□ -0.46
USP30-201ENST00000257548 SLC15A1P46059 708 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 ENPEPQ07075 957 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 CLCA4Q14CN2 919 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 ADPRMQ3LIE5 342 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 SOWAHCQ53LP3 525 aaPredicted RBP12.16□□□□□ -0.46
USP30-201ENST00000257548 ZNF648Q5T619 568 aaPredicted RBP12.16□□□□□ -0.46
USP30-201ENST00000257548 LARP4Q71RC2 724 aaKnown RBP eCLIP12.16□□□□□ -0.46
USP30-201ENST00000257548 RAB43Q86YS6 212 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 LPCAT1Q8NF37 534 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 SENP8Q96LD8 212 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 CSF3RQ99062 836 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 RHNO1Q9BSD3 238 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 RCOR3Q9P2K3 495 aaPredicted RBP12.16□□□□□ -0.46
USP30-201ENST00000257548 ANKMY1Q9P2S6 941 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 CD300AQ9UGN4 299 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 KLHL3Q9UH77 587 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 THSD7AQ9UPZ6 1657 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 CCDC182A6NF36 153 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 M0QZ92 97 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 GPR182O15218 404 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 DYRK3O43781 588 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 CD40LGP29965 261 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 GMPSP49915 693 aaPredicted RBP12.16□□□□□ -0.46
USP30-201ENST00000257548 IL18R1Q13478 541 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 GTDC1Q4AE62 458 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 SLC27A1Q6PCB7 646 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 SCAMP5Q8TAC9 235 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 PTERQ96BW5 349 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 KCNC2Q96PR1 638 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 KIFC1Q9BW19 673 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 YTHDF1Q9BYJ9 559 aaKnown RBP12.16□□□□□ -0.46
USP30-201ENST00000257548 SP140LQ9H930 580 aa12.16□□□□□ -0.46
USP30-201ENST00000257548 AGO3Q9H9G7 860 aaKnown RBP12.16□□□□□ -0.46
USP30-201ENST00000257548 MOV10Q9HCE1 1003 aaKnown RBP12.16□□□□□ -0.46
USP30-201ENST00000257548 IQCF5A8MTL0 148 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 UPK3BL1B0FP48 263 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 UPK3BL2E5RIL1 263 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 MEN1O00255 615 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 PSIP1O75475 530 aaKnown RBP12.15□□□□□ -0.46
USP30-201ENST00000257548 TGFB3P10600 412 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 GDF5P43026 501 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 PPP5CP53041 499 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 KYAT1Q16773 422 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 UAP1L1Q3KQV9 507 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 BLOC1S3Q6QNY0 202 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.15□□□□□ -0.46
USP30-201ENST00000257548 TAC4Q86UU9 113 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 TCAIMQ8N3R3 496 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 MINDY1Q8N5J2 469 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 CHDHQ8NE62 594 aaPredicted RBP12.15□□□□□ -0.46
USP30-201ENST00000257548 TANKQ92844 425 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 TMEM125Q96AQ2 219 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 TRNT1Q96Q11 434 aaKnown RBP12.15□□□□□ -0.46
USP30-201ENST00000257548 GMLQ99445 158 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 GSTO2Q9H4Y5 243 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 TMLHEQ9NVH6 421 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 UTS2RQ9UKP6 389 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 SNX6Q9UNH7 406 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 IFT52Q9Y366 437 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 SMIM28A0A1B0GU29 152 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 C19orf81C9J6K1 198 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 LGALS2P05162 132 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 EIF2S1P05198 315 aaKnown RBP12.15□□□□□ -0.46
USP30-201ENST00000257548 HMGB2P26583 209 aaKnown RBP12.15□□□□□ -0.46
USP30-201ENST00000257548 ADCYAP1R1P41586 468 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 HSPA7P48741 367 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 CCT3P49368 545 aaKnown RBP12.15□□□□□ -0.46
USP30-201ENST00000257548 IL2P60568 153 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 SLC10A7Q0GE19 358 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 SELPLGQ14242 412 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 CATSPEREQ5SY80 951 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 ERAP2Q6P179 960 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 MFSD6LQ8IWD5 586 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 CLIP3Q96DZ5 547 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 PHOX2BQ99453 314 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 SNTG1Q9NSN8 517 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 COL4A5P29400 1685 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 POMCP01189 267 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 VIPP01282 170 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 ATP6V1E1P36543 226 aa12.15□□□□□ -0.46
USP30-201ENST00000257548 ATN1P54259 1190 aaPredicted RBP12.15□□□□□ -0.46
USP30-201ENST00000257548 PYCR3Q53H96 274 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms