RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 CYP3A5P20815 502 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 OLIG2Q13516 323 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 YTHDF3Q7Z739 585 aaKnown RBP18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 IQCF2Q8IXL9 164 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 LEMD2Q8NC56 503 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 HTRA1Q92743 480 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 MAGEH1Q9H213 219 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 PLGRKTQ9HBL7 147 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 NRP1O14786 923 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 SYN3O14994 580 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 RLN1P04808 185 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 DBIP07108 87 aaKnown RBP18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 IL12AP29459 219 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 SP2Q02086 613 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 SLC13A2Q13183 592 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 ACAP2Q15057 778 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 ARSIQ5FYB1 569 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 GALNTL5Q7Z4T8 443 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 SH3RF2Q8TEC5 729 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 NKD2Q969F2 451 aaPredicted RBP18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 STX16-NPEPL1H3BU86 382 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 STX16O14662 325 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 BCKDKO14874 412 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 TBC1D21Q8IYX1 336 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 SLC38A3Q99624 504 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 CCSER2Q9H7U1 834 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 NUDT4Q9NZJ9 180 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 TCRBV7S3A2A0A539 114 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 UBE2QL1A1L167 161 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 XKRYO14609 159 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 AHCYL1O43865 530 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 ZBTB48P10074 688 aaPredicted RBP18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 TAS2R39P59534 338 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 ZDHHC20Q5W0Z9 365 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 OAFQ86UD1 273 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 TCAIMQ8N3R3 496 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 LNX2Q8N448 690 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 TSEN15Q8WW01 171 aaKnown RBP18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 GATA5Q9BWX5 397 aaPredicted RBP18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 TMEM27Q9HBJ8 222 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 GNEQ9Y223 722 aaKnown RBP18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 NOBOXO60393 691 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 SEPHS1P49903 392 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 LCP2Q13094 533 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 ZNF598Q86UK7 904 aaKnown RBP18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 PPIBP23284 216 aaKnown RBP18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 IDH3AP50213 366 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 SLC8B1Q6J4K2 584 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 SRMSQ9H3Y6 488 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 MFHAS1Q9Y4C4 1052 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 FAM86C2PA6NEL3 165 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 BBIP1A8MTZ0 92 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 TRAFD1O14545 582 aaPredicted RBP18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 LARS2Q15031 903 aaKnown RBP18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 TNFAIP8L2Q6P589 184 aaPredicted RBP18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 UBE2J2Q8N2K1 259 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 DEFB119Q8N690 84 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 A8MUA0 341 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 LOC110117498-PIK3R3F6TDL0 507 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 SERPINA1P01009 418 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 CLUP10909 449 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 HYAL2Q12891 473 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 IL18Q14116 193 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 TXNRD3NBQ6F5E7 133 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 LIN54Q6MZP7 749 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 HMGB4Q8WW32 186 aa18.45■□□□□ 0.54
SMARCC1-201ENST00000254480 ALDH4A1P30038 563 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 CREB5Q02930 508 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 PPIGQ13427 754 aaKnown RBP eCLIP18.44■□□□□ 0.541e-7■□□□□ 10.4
SMARCC1-201ENST00000254480 RIPK1Q13546 671 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 COX4I2Q96KJ9 171 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 UROSP10746 265 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 AHCYP23526 432 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 PTGIRP43119 386 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 FAM174BQ3ZCQ3 159 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 CLEC20AQ6ZU45 233 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 RBM18Q96H35 190 aaKnown RBP18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 TRMT61BQ9BVS5 477 aaKnown RBP18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 MINDY3Q9H8M7 445 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 NDUFA5Q16718 116 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 MMAAQ8IVH4 418 aaKnown RBP18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 CBR4Q8N4T8 237 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 IL12RB2Q99665 862 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 DNAJC28Q9NX36 388 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 NIPSNAP2O75323 286 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 TRIM3O75382 744 aaPredicted RBP18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 CAPGP40121 348 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 CCR10P46092 362 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 ATP13A5Q4VNC0 1218 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 FRRS1Q6ZNA5 592 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 OXCT2Q9BYC2 517 aaPredicted RBP18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 ALOX5P09917 674 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 CERS6Q6ZMG9 384 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 IKBIPQ70UQ0 350 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 PIWIL1Q96J94 861 aaKnown RBP18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 COPS4Q9BT78 406 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 NECTIN3Q9NQS3 549 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 ELOVL2Q9NXB9 296 aa18.44■□□□□ 0.54
SMARCC1-201ENST00000254480 CCDC162PA2VCL2 907 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms