RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 NPY6RQ99463 290 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 ZNF556Q9HAH1 456 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 UTS2RQ9UKP6 389 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 EEFSECP57772 596 aaKnown RBP14.34□□□□□ -0.11
PRDM4-201ENST00000228437 SNRPD2P62316 118 aaKnown RBP14.34□□□□□ -0.11
PRDM4-201ENST00000228437 FAM189BP81408 668 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 SMARCB1Q12824 385 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 CSTF3Q12996 717 aaKnown RBP14.34□□□□□ -0.11
PRDM4-201ENST00000228437 TIGD6Q17RP2 521 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 USP41Q3LFD5 358 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 ZNF484Q5JVG2 852 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 KIAA0930Q6ICG6 404 aaPredicted RBP14.34□□□□□ -0.11
PRDM4-201ENST00000228437 CLEC20AQ6ZU45 233 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 HMGCLL1Q8TB92 370 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 KCNC2Q96PR1 638 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 RHNO1Q9BSD3 238 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 PRDM16Q9HAZ2 1276 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 CDH7Q9ULB5 785 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 GPR182O15218 404 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 SNX4O95219 450 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 FKBP1AP62942 108 aaKnown RBP14.34□□□□□ -0.11
PRDM4-201ENST00000228437 SLC10A7Q0GE19 358 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 TBRG1Q3YBR2 411 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.34□□□□□ -0.11
PRDM4-201ENST00000228437 ISCA2Q86U28 154 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 OSTM1Q86WC4 334 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 RAB43Q86YS6 212 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 SPATA2LQ8IUW3 424 aaPredicted RBP14.34□□□□□ -0.11
PRDM4-201ENST00000228437 OR9Q1Q8NGQ5 310 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 LPPQ93052 612 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 UBE2FQ969M7 185 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 NECTIN4Q96NY8 510 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 MOV10Q9HCE1 1003 aaKnown RBP14.34□□□□□ -0.11
PRDM4-201ENST00000228437 SNX6Q9UNH7 406 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 GPSM3Q9Y4H4 160 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 IQCF5A8MTL0 148 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 H0YAE9 185 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 DYRK3O43781 588 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 VPS4BO75351 444 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 TULP3O75386 442 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 ECI2O75521 394 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 POMCP01189 267 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 MYL3P08590 195 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 HSPA7P48741 367 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 OR4D1Q15615 310 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 AAK1Q2M2I8 961 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 CATSPEREQ5SY80 951 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 ZNF549Q6P9A3 640 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 CYP20A1Q6UW02 462 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 SIDT2Q8NBJ9 832 aaKnown RBP14.34□□□□□ -0.11
PRDM4-201ENST00000228437 C2CD4AQ8NCU7 369 aaPredicted RBP14.34□□□□□ -0.11
PRDM4-201ENST00000228437 OR6J1Q8NGC5 347 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 OR4L1Q8NH43 312 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 TRIM63Q969Q1 353 aa14.34□□□□□ -0.11
PRDM4-201ENST00000228437 WDR6Q9NNW5 1121 aaKnown RBP14.34□□□□□ -0.11
PRDM4-201ENST00000228437 J3KR12 359 aa14.33□□□□□ -0.11
PRDM4-201ENST00000228437 LZTS3O60299 673 aaPredicted RBP14.33□□□□□ -0.11
PRDM4-201ENST00000228437 NIPSNAP2O75323 286 aa14.33□□□□□ -0.11
PRDM4-201ENST00000228437 GDF5P43026 501 aa14.33□□□□□ -0.11
PRDM4-201ENST00000228437 DAOAP59103 153 aa14.33□□□□□ -0.11
PRDM4-201ENST00000228437 IL2P60568 153 aa14.33□□□□□ -0.11
PRDM4-201ENST00000228437 PYCR3Q53H96 274 aa14.33□□□□□ -0.11
PRDM4-201ENST00000228437 ZNF648Q5T619 568 aaPredicted RBP14.33□□□□□ -0.11
PRDM4-201ENST00000228437 FAM217AQ8IXS0 508 aa14.33□□□□□ -0.11
PRDM4-201ENST00000228437 OR4K2Q8NGD2 314 aa14.33□□□□□ -0.11
PRDM4-201ENST00000228437 OR6C70A6NIJ9 312 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 UPK3BL1B0FP48 263 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 UPK3BL2E5RIL1 263 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 VIPP01282 170 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 DPEP1P16444 411 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 PNPLA4P41247 253 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 PPP5CP53041 499 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 SOWAHCQ53LP3 525 aaPredicted RBP14.33□□□□□ -0.12
PRDM4-201ENST00000228437 DGKKQ5KSL6 1271 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 SPANXN4Q5MJ08 99 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 GLT6D1Q7Z4J2 308 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 PELI3Q8N2H9 469 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 PCED1BQ96HM7 432 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 CNPPD1Q9BV87 410 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 C8orf4Q9NR00 106 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 STMN3Q9NZ72 180 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 KLHL3Q9UH77 587 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 HNRNPCL2B2RXH8 293 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 FYNP06241 537 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 DNAJB2P25686 324 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 DNAJB13P59910 316 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 IL18R1Q13478 541 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 TXNDC11Q6PKC3 985 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 CYP2U1Q7Z449 544 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 SPATA19Q7Z5L4 167 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 CDH24Q86UP0 819 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 ELMOD2Q8IZ81 293 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 TCAIMQ8N3R3 496 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 GPR78Q96P69 363 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 TRNT1Q96Q11 434 aaKnown RBP14.33□□□□□ -0.12
PRDM4-201ENST00000228437 CCDC182A6NF36 153 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 EIF2S1P05198 315 aaKnown RBP14.33□□□□□ -0.12
PRDM4-201ENST00000228437 CES5AQ6NT32 575 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 GPRIN1Q7Z2K8 1008 aa14.33□□□□□ -0.12
PRDM4-201ENST00000228437 CADM2Q8N3J6 435 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms