RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Thap11Q9JJD0 305 aa18.07■□□□□ 0.48
Trim47-202ENSMUST00000106441 Slc2a5Q9WV38 501 aa18.07■□□□□ 0.48
Trim47-202ENSMUST00000106441 Igf2bp1O88477 577 aaKnown RBP18.07■□□□□ 0.48
Trim47-202ENSMUST00000106441 Colec11Q3SXB8 272 aa18.07■□□□□ 0.48
Trim47-202ENSMUST00000106441 Sdf4Q61112 361 aa18.07■□□□□ 0.48
Trim47-202ENSMUST00000106441 Btnl1Q7TST0 509 aa18.07■□□□□ 0.48
Trim47-202ENSMUST00000106441 IlkapQ8R0F6 392 aa18.07■□□□□ 0.48
Trim47-202ENSMUST00000106441 Dph2Q9CR25 489 aa18.07■□□□□ 0.48
Trim47-202ENSMUST00000106441 Vps35Q9EQH3 796 aaKnown RBP18.07■□□□□ 0.48
Trim47-202ENSMUST00000106441 Trem1Q9JKE2 230 aa18.07■□□□□ 0.48
Trim47-202ENSMUST00000106441 SqorQ9R112 450 aa18.07■□□□□ 0.48
Trim47-202ENSMUST00000106441 Ighg3A0A1Y7VJN6 399 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Tmem215A7E1Z1 235 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Znf518bB2RRE4 1077 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Tcp10cE9Q046 482 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Gm4847G3X946 537 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Gfra2O08842 464 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Pik3cdO35904 1043 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Krt73Q6NXH9 539 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Gpr62Q80UC6 358 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 MtbpQ8BJS8 894 aaKnown RBP18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Cnpy4Q8BQ47 245 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Prdm8Q8BZ97 687 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Q8C4P0 716 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Q8CDN1 933 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Acad9Q8JZN5 625 aaKnown RBP18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Impg1Q8R1W8 798 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Klrb1fQ8VD98 217 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 NlnQ91YP2 704 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Tfap2dQ91ZK0 452 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Tmem9Q9CR23 183 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Eef1akmt2Q9D853 244 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 P33monoxQ9DBN4 303 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Gipc1Q9Z0G0 333 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Sec14l5B2RXM5 696 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Cdh18E9Q9Q6 790 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 ClockO08785 855 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Lrrc23O35125 340 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 AxlQ00993 888 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Bdkrb1Q61125 334 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Eif2b4Q61749 524 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Ubtd2Q6PGH0 234 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Rbms3Q8BWL5 431 aaKnown RBP18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Defb36Q8K3U4 67 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Mtg1Q8R2R6 326 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 AasdhpptQ9CQF6 309 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 4933425L06RikQ9D3Z8 585 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 IkbkeQ9R0T8 717 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 M1apQ9Z0E1 529 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Mad2l1Q9Z1B5 205 aa18.06■□□□□ 0.48
Trim47-202ENSMUST00000106441 Mroh7A2AVR2 1279 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Man2b1O09159 1013 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Timm13P62075 95 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Eif4ebp2P70445 120 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 TgfbiP82198 683 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 CtscP97821 462 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Hk3Q3TRM8 922 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Eps15l1Q60902 907 aaKnown RBP18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Prickle2Q80Y24 845 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Ptbp3Q8BHD7 523 aaKnown RBP18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 B430218F22RikQ8BQR5 223 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Frs2Q8C180 508 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Ints10Q8K2A7 710 aaKnown RBP18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Asz1Q8VD46 475 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Olfr665Q8VG79 316 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Ppp6cQ9CQR6 305 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Q9D1F3 157 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Snrnp48Q9D361 337 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 LrgukQ9D5S7 820 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Gsk3bQ9WV60 420 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Katna1Q9WV86 491 aa18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Stau1Q9Z108 487 aaKnown RBP18.05■□□□□ 0.48
Trim47-202ENSMUST00000106441 Krt83E9Q1Y9 479 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 ApoeP08226 311 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Fmo5P97872 533 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Inf2Q0GNC1 1273 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 CapslQ6P8Y1 208 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Dclk2Q6PGN3 756 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Strip2Q8C9H6 844 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Ces2aQ8QZR3 558 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Mcoln3Q8R4F0 553 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 EedQ921E6 441 aaKnown RBP18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Lactb2Q99KR3 288 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Ppil6Q9D6D8 278 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Erich1E9PY43 332 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Gm44G3UW88 330 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Gm5571P01639 130 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Cd247P24161 164 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 PrkcgP63318 697 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 BtrcQ3ULA2 605 aaKnown RBP18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Brsk1Q5RJI5 778 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Olfr667Q7TRP4 326 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Susd6Q8BGE4 302 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Pcdh20Q8BIZ0 952 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Pi4k2bQ8CBQ5 469 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Zcchc9Q8R1J3 271 aaKnown RBP18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 RhoqQ8R527 205 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Cers2Q924Z4 380 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Nck1Q99M51 377 aa18.04■□□□□ 0.48
Trim47-202ENSMUST00000106441 Cyp4f13Q99N19 523 aa18.04■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms