RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Tmx2Q9D710 295 aaKnown RBP9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Pgam1Q9DBJ1 254 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Trpc4Q9QUQ5 974 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 CasrQ9QY96 1079 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Bloc1s6Q9R0C0 172 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 HaspinQ9Z0R0 754 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fads2Q9Z0R9 444 aaKnown RBP9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mfsd13bA0A1L1SUA2 455 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 DffaO54786 331 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Got1P05201 413 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Hoxa9P09631 271 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Nr2c2P49117 596 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Akr1c6P70694 323 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Serpina3mQ03734 418 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfr725Q05A45 321 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmem253Q3UNB8 204 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Nrsn2Q5HZK2 202 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Klhl17Q6TDP3 640 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Lsm8Q6ZWM4 96 aaKnown RBP9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Wfikkn2Q7TQN3 571 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Clptm1lQ8BXA5 539 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Camkk2Q8C078 588 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 4931406P16RikQ8C5X1 1059 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rbm4Q8C7Q4 361 aaKnown RBP9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mill2Q8HWE5 355 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cnot3Q8K0V4 751 aaKnown RBP9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cog4Q8R1U1 785 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rbm4bQ8VE92 357 aaKnown RBP9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfr668Q8VGW3 318 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 EtfdhQ921G7 616 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cryl1Q99KP3 319 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Atp6v1c2Q99L60 427 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gins4Q99LZ3 223 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ogfod2Q9CQ04 349 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 CenpsQ9D084 142 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 CinpQ9D0V8 212 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Plekhj1Q9D240 164 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fam3bQ9D309 235 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Pou5f2Q9DAC9 329 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 RangrfQ9JIB0 185 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cav2Q9WVC3 162 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm34653A0A1L1SR01 368 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Lzts3A2AHG0 700 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vmn1r3A2AMT7 306 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rhox2fA2ANE0 191 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 A930018M24RikB7ZMY3 218 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm3259D3YUK0 475 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm6205E9PZS2 359 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Prdm13E9PZZ1 754 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Aldh3b2E9Q3E1 479 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Lin7bO88951 207 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Yme1l1O88967 715 aaKnown RBP9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cd40lgP27548 260 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Il12aP43431 215 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gadd45aP48316 165 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tsc22d1P62500 1077 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mfsd14aP70187 490 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Itga4Q00651 1039 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 9130409I23RikQ3TS87 320 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Pgap1Q3UUQ7 922 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmub2Q3V209 319 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Haus6Q6NV99 933 aaKnown RBP9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Bfsp2Q6NVD9 416 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tas2r3Q7TQA7 316 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gpr151Q7TSN6 422 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Q80Y39 304 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 SgtaQ8BJU0 315 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 SowahdQ8BY98 327 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Klhl12Q8BZM0 568 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm6367Q8C6L9 287 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tada2aQ8CHV6 443 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Kiaa0391Q8JZY4 584 aaKnown RBP9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ddx54Q8K4L0 874 aaKnown RBP9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vmn1r79Q8R285 306 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Spon1Q8VCC9 807 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfr784Q8VFZ9 319 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 HibadhQ99L13 335 aaKnown RBP9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Bco2Q99NF1 532 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 MutyhQ99P21 515 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 EurlQ9D7G4 290 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Marveld3Q9D956 376 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cables1Q9ESJ1 568 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 FibpQ9JI19 357 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Psmg1Q9JK23 289 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Kcne5Q9QZ26 143 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Usp21Q9QZL6 566 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Nfkb2Q9WTK5 899 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gsk3bQ9WV60 420 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Celf2Q9Z0H4 508 aaKnown RBP9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Itgb6Q9Z0T9 787 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Zfp142G5E869 1843 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ltbp2O08999 1813 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Zfp383A0A087WRR7 490 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfr663A0A1B0GSI9 319 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfr1123A2AT85 323 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rdh8D3Z6W3 317 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Prom1O54990 867 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mab21l1O70299 359 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Slc22a2O70577 553 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 MndaP0DOV1 425 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms