RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Bcat2O35855 393 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Eef1bO70251 225 aaKnown RBP11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Ap1m1P35585 423 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Evx2P49749 475 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Gucy2eP52785 1108 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Arhgap39P59281 1107 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Tbx1P70323 479 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 FcamrQ2TB54 535 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Defb23Q30KP0 166 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Kdm4dQ3U2K5 510 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Ifnl2Q4VK74 193 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Taar7dQ5QD10 358 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Tdrd5Q5VCS6 1040 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Map3k3Q61084 626 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Irak1Q62406 710 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Fam126aQ6P9N1 521 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Fbxo42Q6PDJ6 717 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Vmn2r26Q6TAC4 855 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Ddrgk1Q80WW9 315 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Q8BHB7 409 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Tmem214Q8BM55 687 aaKnown RBP11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Zhx3Q8C0Q2 951 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 4932411N23RikQ8C0S0 470 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Yipf4Q8C407 246 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Adam4Q8CGQ2 763 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Mettl22Q8R1C6 393 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 CthQ8VCN5 398 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Mospd1Q8VEL0 213 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Fgfrl1Q91V87 529 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Spats2lQ91WJ7 558 aaKnown RBP11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Pcdha5Q91Y15 934 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Grhl1Q921D9 618 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Hemk1Q921L7 340 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 LsrQ99KG5 594 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Tcam1Q99NB3 548 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Sar1bQ9CQC9 198 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 NapgQ9CWZ7 312 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Cnbd2Q9D5U8 673 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Dusp3Q9D7X3 185 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Ifi35Q9D8C4 286 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Rexo2Q9D8S4 237 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Usp12Q9D9M2 370 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Arr3Q9EQP6 381 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Cmtm7Q9ESD6 167 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 RalbQ9JIW9 206 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Tmed2Q9R0Q3 201 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Mmp17Q9R0S3 578 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Eif2s3yQ9Z0N2 472 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 H2afb2S4R1M3 115 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 SpenQ62504 3644 aaKnown RBP11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 SvilQ8K4L3 2170 aa11.89□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 TprF6ZDS4 2431 aaKnown RBP11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Ppp1r36D3Z0R2 411 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Cxcl10P17515 98 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Gng11P61953 73 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Larp7Q05CL8 570 aaKnown RBP11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Inf2Q0GNC1 1273 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Gdpd4Q3TT99 632 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Slfn4Q3UV66 602 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Clpsl2Q3UW21 102 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 MuskQ61006 868 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Znf148Q61624 794 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Tspyl5Q69ZB3 406 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Nomo1Q6GQT9 1214 aaKnown RBP11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Rasgrp3Q6NZH9 691 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 TxlnaQ6PAM1 554 aaKnown RBP11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Olfr1152Q7TR34 310 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 ChfrQ810L3 664 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 B430218F22RikQ8BQR5 223 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Etf1Q8BWY3 437 aaKnown RBP11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Vps37bQ8R0J7 285 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Gfm2Q8R2Q4 779 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 McatQ8R3F5 381 aaKnown RBP11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Pycr2Q922Q4 320 aaKnown RBP11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Hars2Q99KK9 505 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Ndufa10Q99LC3 355 aaKnown RBP11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Ankra2Q99PE2 312 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Pih1d1Q9CQJ2 290 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Bbs10Q9DBI2 713 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Tsc1Q9EP53 1161 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Cts6Q9ET52 334 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Jph2Q9ET78 696 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 SigirrQ9JLZ8 409 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Stap1Q9JM90 297 aaKnown RBP11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Rdh11Q9QYF1 316 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Clec2iQ9WVF9 217 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Eif2s3xQ9Z0N1 472 aaKnown RBP11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Ern2Q9Z2E3 911 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Abca7Q91V24 2159 aa11.88□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Lrrk2Q5S006 2527 aa11.87□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Gm13723A0A1L1SUP2 315 aa11.87□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Gbp11A9YVJ5 442 aa11.87□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Zfp174B9EJW5 407 aa11.87□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Zc3h7aE9PWW6 970 aaKnown RBP11.87□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Lrrc31F6VYM1 502 aa11.87□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Morc3F7BJB9 942 aaKnown RBP11.87□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Vmn2r21K7N6Y7 853 aa11.87□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Vmn2r12L7N217 831 aa11.87□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Vmn2r20L7N2B1 853 aa11.87□□□□□ -0.51
Ccdc28a-202ENSMUST00000080860 Exoc7O35250 697 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms