RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Trpv6Q91WD2 767 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Dtnbp1Q91WZ8 352 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 FtcdQ91XD4 541 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mgat2Q921V5 442 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Bzw1Q9CQC6 419 aaKnown RBP8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 C1qtnf2Q9D8U4 294 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Zfpl1Q9DB43 310 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 PgdQ9DCD0 483 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Zfp804bA0A0G2JGH6 1343 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 BcorQ8CGN4 1759 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ano3A2AHL1 981 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm14692A2BH01 229 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Osbpl8B9EJ86 889 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm1141B9EJU1 475 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm8237E9Q257 205 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ercc2O08811 760 aaKnown RBP8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gfra2O08842 464 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Dync1i2O88487 612 aaKnown RBP8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Slc6a18O88576 615 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 H2-AaP01910 256 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pgk2P09041 417 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 EporP14753 507 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 TfamP40630 243 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Shmt1P50431 478 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Efnb1P52795 345 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 CebpdQ00322 268 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Grin2cQ01098 1239 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 ChatQ03059 641 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Parp3Q3ULW8 533 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Vwa3aQ3UVV9 1148 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 R3hdm4Q4VBF2 262 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Slc39a12Q5FWH7 689 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 AlcamQ61490 583 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fscn1Q61553 493 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Prkd1Q62101 918 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cyp3a13Q64464 503 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 St8sia3Q64689 380 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 WlsQ6DID7 541 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cypt4Q6P925 153 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fbxo42Q6PDJ6 717 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Slc6a15Q8BG16 729 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 MastlQ8C0P0 865 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mettl21eQ8CDZ2 244 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mill1Q8HWE7 395 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ugt2b37Q8VCN3 530 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Sirt2Q8VDQ8 389 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cisd2Q9CQB5 135 aaKnown RBP8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Desi1Q9CQT7 168 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ppil3Q9D6L8 161 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ing5Q9D8Y8 240 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Wdr83Q9DAJ4 315 aaKnown RBP8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Krt7Q9DCV7 457 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ptf1aQ9QX98 324 aa8.95□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mrc1Q61830 1456 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm29866A0A0A6YX04 222 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tmem201A2A8U2 664 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 BC024978J3QPC3 361 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fmr1P35922 614 aaKnown RBP8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 TgfaP48030 159 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rasd2P63032 266 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gata4Q08369 441 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Klrg2Q3UM83 387 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ctxn2Q3URE8 81 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Slc30a10Q3UVU3 470 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Q3UY34 256 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tlx2Q61663 284 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Atp11bQ6DFW5 1175 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Krt42Q6IFX2 452 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Atxn2lQ7TQH0 1049 aaKnown RBP8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Derl2Q8BNI4 239 aaKnown RBP8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Lrch3Q8BVU0 778 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Atg16l1Q8C0J2 607 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gpr158Q8C419 1200 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ccdc60Q8C4J0 545 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mtnr1bQ8CIQ6 364 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Trnt1Q8K1J6 434 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Vmn1r237Q8R296 289 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr1416Q8VGU4 312 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Q91V76 315 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Kiaa2013Q91X21 634 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 CsprsQ99388 208 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ophn1Q99J31 802 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Snrpb2Q9CQI7 225 aaKnown RBP8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fam227aQ9D3V8 625 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ccdc83Q9D4V3 305 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rnft1Q9DCN7 395 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Jph1Q9ET80 660 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 DiabloQ9JIQ3 237 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Csnk1eQ9JMK2 416 aaKnown RBP8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 MioxQ9QXN5 285 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Bag6Q9Z1R2 1154 aaKnown RBP8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Serpinb6cW4VSP4 379 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Col5a2Q3U962 1497 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Kank1E9Q238 1360 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 MypnQ5DTJ9 1315 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm12394A2AKP6 982 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm5934D3Z4U6 212 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Kbtbd6E9PYD7 486 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Eddm13E9Q7F5 164 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 NsmafO35242 920 aa8.94□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms