RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Vmn1r55E9Q8I6 310 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Gm8011K7N6Y5 207 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Btbd1P58544 488 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Gmeb2P58929 530 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Hexim2Q3TVI4 313 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Arcn1Q5XJY5 511 aaKnown RBP11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Tssk1bQ61241 365 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Slc6a17Q8BJI1 727 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Chrnb3Q8BMN3 464 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Vrk2Q8BN21 503 aaKnown RBP11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 RhbgQ8BUX5 455 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Fam155aQ8CCS2 467 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Cnot6Q8K3P5 557 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Lcn9Q9D267 178 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Cyp3a41aQ9JMA7 504 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Cst9Q9Z0H6 137 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 H2-BlV9GXR0 257 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ecm29Q6PDI5 1840 aa11.89□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Tdrd6P61407 2134 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Gm7145A0A087WS64 360 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Gm8237E9Q257 205 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Gnpda1O88958 289 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ube2e3P52483 207 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 E2f2P56931 443 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ptchd3Q0EEE2 906 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Cfhr2Q4LDF6 332 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Lcp2Q60787 533 aaKnown RBP11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Fzd3Q61086 666 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 MafkQ61827 156 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ifit3Q64345 403 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Olfr735Q7TRM4 354 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Shc2Q8BMC3 573 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Cxcl16Q8BSU2 246 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Nrip1Q8CBD1 1161 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Polr1eQ8K202 482 aaKnown RBP11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ak5Q920P5 562 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Smarcd2Q99JR8 531 aaKnown RBP11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Trim8Q99PJ2 551 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Tex22Q9D9U4 189 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ube4bQ9ES00 1173 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Top3bQ9Z321 862 aaKnown RBP11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Fbxo47A2A6H3 451 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Olfr596F8VQ26 312 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Gm6337K7N6X9 211 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Gm3115L7N285 211 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Bcl7cO08664 217 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Zfp28P10078 825 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Pip5k1bP70181 539 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ctps2P70303 586 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Polr1bP70700 1135 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Sox4Q06831 440 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 TraddQ3U0V2 310 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Gtpbp2Q3UJK4 602 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Rfx4Q7TNK1 735 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Olfr384Q7TRX8 312 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Dnajc16Q80TN4 772 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Fndc5Q8K4Z2 209 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Chrna3Q8R4G9 499 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Aco2Q99KI0 780 aaKnown RBP11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Clp1Q99LI9 425 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Tomm70Q9CZW5 611 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Arl2Q9D0J4 184 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Mcemp1Q9D8U6 183 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Atg7Q9D906 698 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Dhx34Q9DBV3 1145 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Aqp5Q9WTY4 265 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Prrt4B2RU40 902 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ptrhd1D3Z4S3 140 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Il20rbE9Q9A6 308 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Tnfsf4P43488 198 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Kcnh6Q32ME0 950 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Stxbp5lQ5DQR4 1185 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Rassf5Q5EBH1 413 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Slc10a7Q5PT53 340 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Scaf4Q6PFF0 1209 aaKnown RBP11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Dnajc15Q78YY6 149 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Cnpy4Q8BQ47 245 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 ReltQ8BX43 436 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Cers6Q8C172 384 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Acsm2Q8K0L3 575 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Usp45Q8K387 813 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 DutQ8VCG1 200 aaKnown RBP11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Hspa14Q99M31 509 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ogfod2Q9CQ04 349 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 AenQ9CZI9 336 aaKnown RBP11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Spata1Q9D5R4 444 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Actrt2Q9D9L5 377 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Carm1Q9WVG6 608 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Polr2aP08775 1970 aaKnown RBP11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 FocadA2AKG8 1798 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Mast2Q60592 1734 aa11.88□□□□□ -0.51
Ctr9-201ENSMUST00000005749 1700001O22RikA2APZ1 375 aa11.87□□□□□ -0.51
Ctr9-201ENSMUST00000005749 PpigA2AR02 752 aaKnown RBP11.87□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Cdh16O88338 830 aa11.87□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ccr4P51680 360 aa11.87□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Nr2f1Q60632 422 aa11.87□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Six4Q61321 775 aa11.87□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Tnfaip8l1Q8K288 186 aa11.87□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Cops8Q8VBV7 209 aa11.87□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Olfr1311Q8VET0 312 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms