RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 IKZF3Q9UKT9 509 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 CKAP5Q14008 2032 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 PLXNA2O75051 1894 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 BPTFQ12830 3046 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 TMEM114B3SHH9 223 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 ITM2AO43736 263 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 MTX2O75431 263 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 LYPLA1O75608 230 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-221ENST00000641573 AP2A2O94973 939 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 PCDH8O95206 1070 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 TSPAN12O95859 305 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 ATP1B2P14415 290 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-221ENST00000641573 GPR1P46091 355 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 KCNC1P48547 511 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 ABCE1P61221 599 aaKnown RBP12.91□□□□□ -0.34
PHGDH-221ENST00000641573 DPTQ07507 201 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 ASPHQ12797 758 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 OVGP1Q12889 678 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 CCINQ13939 588 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 OR4D1Q15615 310 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 ZSCAN26Q16670 478 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 HSF5Q4G112 596 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-221ENST00000641573 ZNF648Q5T619 568 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-221ENST00000641573 NAPRTQ6XQN6 538 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 DET1Q7L5Y6 550 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 NLRP8Q86W28 1048 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 CRLF3Q8IUI8 442 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 ZBTB2Q8N680 514 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 RHEBL1Q8TAI7 183 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 KIAA1191Q96A73 305 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 THOC1Q96FV9 657 aaKnown RBP12.91□□□□□ -0.34
PHGDH-221ENST00000641573 PANX3Q96QZ0 392 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 LMAN1LQ9HAT1 526 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 LATS2Q9NRM7 1088 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 SPATS2LQ9NUQ6 558 aaKnown RBP12.91□□□□□ -0.34
PHGDH-221ENST00000641573 FBXL12Q9NXK8 326 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 ZMIZ1Q9ULJ6 1067 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 RALGAPA1Q6GYQ0 2036 aa12.91□□□□□ -0.34
PHGDH-221ENST00000641573 ZZEF1O43149 2961 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 PLXNB3Q9ULL4 1909 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 NPEPPSL1A6NEC2 478 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 NEMP2A6NFY4 417 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 IGLON5A6NGN9 336 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 A8MT66 165 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 CHURC1-FNTBB4DL54 471 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 K7ESM1 405 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 CDC7O00311 574 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 BTN3A1O00481 513 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 INPP4BO15327 924 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 HRO43593 1189 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 MAGEC1O60732 1142 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 KERAO60938 352 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 SMIM24O75264 130 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 TM7SF2O76062 418 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 TGDSO95455 350 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 SOD1P00441 154 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 TROVE2P10155 538 aaKnown RBP eCLIP12.9□□□□□ -0.34
PHGDH-221ENST00000641573 DGKAP23743 735 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 FNTBP49356 437 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 RGS4P49798 205 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 DNAJB13P59910 316 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 ZBTB16Q05516 673 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 TTLL9Q3SXZ7 439 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 KHDC1Q4VXA5 237 aaKnown RBP12.9□□□□□ -0.34
PHGDH-221ENST00000641573 ACSBG2Q5FVE4 666 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 RAET1GQ6H3X3 334 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 PHYKPLQ8IUZ5 450 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 PELI3Q8N2H9 469 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 STAG3L4Q8TBR4 150 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 EXT2Q93063 718 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 FAM131CQ96AQ9 280 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 CCDC126Q96EE4 140 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 SIPA1Q96FS4 1042 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 PDLIM5Q96HC4 596 aaKnown RBP12.9□□□□□ -0.34
PHGDH-221ENST00000641573 ATOH8Q96SQ7 321 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 C20orf27Q9GZN8 174 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 CYP4F12Q9HCS2 524 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 KCTD5Q9NXV2 234 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 KLHL14Q9P2G3 628 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 KLHL42Q9P2K6 505 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 MBD1Q9UIS9 605 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-221ENST00000641573 CNOT6Q9ULM6 557 aaKnown RBP12.9□□□□□ -0.34
PHGDH-221ENST00000641573 RNF112Q9ULX5 631 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 MMP17Q9ULZ9 603 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 SCML1Q9UN30 329 aa12.9□□□□□ -0.34
PHGDH-221ENST00000641573 CCDC189A1A4V9 331 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 C1QTNF9BB2RNN3 333 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 EBAG9O00559 213 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 PLRG1O43660 514 aaKnown RBP12.89□□□□□ -0.35
PHGDH-221ENST00000641573 SGTAO43765 313 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 HSPA4LO95757 839 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 C1QTNF9P0C862 333 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 TPBGLP0DKB5 382 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 ARRB2P32121 409 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 NAGLUP54802 743 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 SRSF5Q13243 272 aaKnown RBP12.89□□□□□ -0.35
PHGDH-221ENST00000641573 TSNQ15631 228 aaKnown RBP12.89□□□□□ -0.35
PHGDH-221ENST00000641573 CRY1Q16526 586 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 TTC31Q49AM3 519 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-221ENST00000641573 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms