RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 LIMK1P53667 647 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 SUZ12Q15022 739 aaKnown RBP19.06■□□□□ 0.64
HLA-A-209ENST00000638375 UAP1Q16222 522 aaPredicted RBP19.06■□□□□ 0.64
HLA-A-209ENST00000638375 EMBQ6PCB8 327 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 LVRNQ6Q4G3 990 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 ZC3HC1Q86WB0 502 aaKnown RBP19.06■□□□□ 0.64
HLA-A-209ENST00000638375 SFTPA2Q8IWL1 248 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 FAM46DQ8NEK8 389 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 OR4C6Q8NH72 309 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 ELMO1Q92556 727 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 FAM122AQ96E09 287 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 CYTH2Q99418 400 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 NDNQ99608 321 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 CPNE1Q99829 537 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 AARSD1Q9BTE6 412 aaKnown RBP19.06■□□□□ 0.64
HLA-A-209ENST00000638375 COG4Q9H9E3 785 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 NLGN3Q9NZ94 848 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 GALPQ9UBC7 116 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 TBC1D29Q9UFV1 150 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 DOLKQ9UPQ8 538 aa19.06■□□□□ 0.64
HLA-A-209ENST00000638375 A0A087WUV0 522 aaPredicted RBP19.05■□□□□ 0.64
HLA-A-209ENST00000638375 A6NCN8 305 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 F8W8V4 182 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 H3BMM5 538 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 CTIFO43310 598 aaKnown RBP19.05■□□□□ 0.64
HLA-A-209ENST00000638375 FAM155BO75949 473 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 GSTM1P09488 218 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 GP5P40197 560 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 TIAL1Q01085 375 aaKnown RBP eCLIP19.05■□□□□ 0.64
HLA-A-209ENST00000638375 GSTM4Q03013 218 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 NAB1Q13506 487 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 SLC29A2Q14542 456 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 SPNS2Q8IVW8 549 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 CFAP206Q8IYR0 622 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 EID2Q8N6I1 236 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 CAVIN3Q969G5 261 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 FAM136AQ96C01 138 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 ATXN7L3BQ96GX2 97 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 PANX3Q96QZ0 392 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 CCDC68Q9H2F9 335 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 RHOJQ9H4E5 214 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 PRDM8Q9NQV8 689 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 COMMD10Q9Y6G5 202 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 GVINP1Q7Z2Y8 2422 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 PIKFYVEQ9Y2I7 2098 aa19.05■□□□□ 0.64
HLA-A-209ENST00000638375 SLC5A10A0PJK1 596 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 KLHL33A6NCF5 533 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 FLRT2O43155 660 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 SNX2O60749 519 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 AOAHP28039 575 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 GRK6P43250 576 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 CSE1LP55060 971 aaKnown RBP19.04■□□□□ 0.64
HLA-A-209ENST00000638375 BOP1Q14137 746 aaKnown RBP19.04■□□□□ 0.64
HLA-A-209ENST00000638375 SEPT7Q16181 437 aaKnown RBP19.04■□□□□ 0.64
HLA-A-209ENST00000638375 C6orf132Q5T0Z8 1188 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 METRNLQ641Q3 311 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 ACVR1CQ8NER5 493 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 UBLCP1Q8WVY7 318 aaPredicted RBP19.04■□□□□ 0.64
HLA-A-209ENST00000638375 KCNJ9Q92806 393 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 MRRFQ96E11 262 aaKnown RBP19.04■□□□□ 0.64
HLA-A-209ENST00000638375 VPS39Q96JC1 886 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 RBBP8Q99708 897 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 TSSK1BQ9BXA7 367 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 DPEP2Q9H4A9 486 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 SCHIP1Q9P0W5 487 aaPredicted RBP19.04■□□□□ 0.64
HLA-A-209ENST00000638375 CORO1CQ9ULV4 474 aaPredicted RBP19.04■□□□□ 0.64
HLA-A-209ENST00000638375 WDR37Q9Y2I8 494 aa19.04■□□□□ 0.64
HLA-A-209ENST00000638375 ASCC3Q8N3C0 2202 aaKnown RBP19.03■□□□□ 0.64
HLA-A-209ENST00000638375 B4DGG1 531 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 SIGLEC6O43699 453 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 SH3BP5O60239 455 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 NOBOXO60393 691 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 ALPPL2P10696 532 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 BRAFP15056 766 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 CHRM3P20309 590 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 IDSP22304 550 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 RPL10P27635 214 aaKnown RBP19.03■□□□□ 0.64
HLA-A-209ENST00000638375 HSD17B3P37058 310 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 PREPP48147 710 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 CLCN7P51798 805 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 BRD3Q15059 726 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 KLHL38Q2WGJ6 581 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 HECTD2Q5U5R9 776 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 OGFOD3Q6PK18 319 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 ALYREFQ86V81 257 aaKnown RBP19.03■□□□□ 0.64
HLA-A-209ENST00000638375 NAXDQ8IW45 347 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 NAGSQ8N159 534 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 GPATCH11Q8N954 259 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 MYRIPQ8NFW9 859 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 GIMAP7Q8NHV1 300 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 NETO1Q8TDF5 533 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 ZDHHC1Q8WTX9 485 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 PATE1Q8WXA2 126 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 SLC30A3Q99726 388 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 DUSP23Q9BVJ7 150 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 SARS2Q9NP81 518 aaKnown RBP19.03■□□□□ 0.64
HLA-A-209ENST00000638375 LATS2Q9NRM7 1088 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 SIRPGQ9P1W8 387 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 TXNDC16Q9P2K2 825 aa19.03■□□□□ 0.64
HLA-A-209ENST00000638375 PCOLCE2Q9UKZ9 415 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms