RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ELP4Q96EB1 424 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 PRR11Q96HE9 360 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 WDFY2Q96P53 400 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GNRHR2Q96P88 292 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 INPP4AQ96PE3 977 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 CRAMP1Q96RY5 1269 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GAD1Q99259 594 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SLC29A1Q99808 456 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 WDR83Q9BRX9 315 aaKnown RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 MCMBPQ9BTE3 642 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 EFHD1Q9BUP0 239 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SPATA16Q9BXB7 569 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ADGRE3Q9BY15 652 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GPR87Q9BY21 358 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 DPH1Q9BZG8 443 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 PKIBQ9C010 78 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 CDT1Q9H211 546 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 CHST8Q9H2A9 424 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GPN1Q9HCN4 374 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 ACSS2Q9NR19 701 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 TUBG2Q9NRH3 451 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 EURLQ9NYK6 297 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 WSB2Q9NYS7 404 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 SMARCAL1Q9NZC9 954 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 KCND2Q9NZV8 630 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 WNT16Q9UBV4 365 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 DNAJB4Q9UDY4 337 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 IL20RAQ9UHF4 553 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 TMEFF2Q9UIK5 374 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 FZD10Q9ULW2 581 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 VPS4AQ9UN37 437 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 NCKAP1Q9Y2A7 1128 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ADAM18Q9Y3Q7 739 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 PCDHA1Q9Y5I3 950 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 RAD54BQ9Y620 910 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 MAD1L1Q9Y6D9 718 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 NUMBLQ9Y6R0 609 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 FRMPD4Q14CM0 1322 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PTCH1Q13635 1447 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 TRBV23OR9-2A0A075B6M9 112 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 A0A087WV48 116 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 LOC390937A0A1W2PQ73 354 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 HELTA6NFD8 242 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 OR52A4PA6NMU1 304 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CDRT15L2A8MXV6 281 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 KIF28PB7ZC32 967 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 FAM47E-STBD1D6RA91 191 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 E7ENQ6 273 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 K7EQM0 130 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ZNF701M0R085 212 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 KCNK3O14649 394 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SLC30A4O14863 429 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CLIC2O15247 247 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 MEFVO15553 781 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 CALUO43852 315 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 SSX5O60225 188 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 TAF5LO75529 589 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 RPS6KA4O75676 772 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CIAO1O76071 339 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PDE9AO76083 593 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 TOMM70O94826 608 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 UFL1O94874 794 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CCNB2O95067 398 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 NTSR2O95665 410 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CALCAP01258 141 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 FGBP02675 491 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 IL6P05231 212 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 RPLP2P05387 115 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 ENO1P06733 434 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 THBDP07204 575 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CD3EP07766 207 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SNRPAP09012 282 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 STAG3L2P0CL84 134 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 HSMCR30P0CW71 290 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 C8orf89P0DMQ9 161 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 F3P13726 295 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 DARSP14868 501 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 ATF6P18850 670 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 KRT15P19012 456 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SRMP19623 302 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ITIH1P19827 911 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 NCF2P19878 526 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 NR1D1P20393 614 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CYP2F1P24903 491 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 IL1R2P27930 398 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PDHA2P29803 388 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CCND3P30281 292 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 GRK3P35626 688 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 LTBRP36941 435 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SPAM1P38567 509 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ALDH1A3P47895 512 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PCYT1AP49585 367 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CEBPDP49716 269 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 SERPINB8P50452 374 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 RAB28P51157 221 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CLCN5P51795 746 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 MTTPP55157 894 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CDH15P55291 814 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 LGALS4P56470 323 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms