RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 DEFB133Q30KQ1 61 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 INAVAQ3KP66 663 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 ZNF658BQ4V348 819 aaPredicted RBP15.72■□□□□ 0.11
CLN6-216ENST00000636876 ZNF549Q6P9A3 640 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 DBX2Q6ZNG2 339 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 STRA8Q7Z7C7 330 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 CTAGE3PQ8IX95 158 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 PPM1NQ8N819 430 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 OR4C6Q8NH72 309 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 LKAAEAR1Q8TD35 194 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 AENQ8WTP8 325 aaKnown RBP15.72■□□□□ 0.11
CLN6-216ENST00000636876 CYTH2Q99418 400 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 TSSK1BQ9BXA7 367 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 CCDC68Q9H2F9 335 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 OSGEPL1Q9H4B0 414 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 ACSS3Q9H6R3 686 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 NLGN3Q9NZ94 848 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 TAAR2Q9P1P5 351 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 GULP1Q9UBP9 304 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 CACNA1BQ00975 2339 aa15.72■□□□□ 0.11
CLN6-216ENST00000636876 A0A087WUV0 522 aaPredicted RBP15.71■□□□□ 0.11
CLN6-216ENST00000636876 C17orf113A0A1B0GUU1 675 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 IQCF5A8MTL0 148 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 FLRT2O43155 660 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 TRIM16O95361 564 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 ALPPL2P10696 532 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 ITGB6P18564 788 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 GRK6P43250 576 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 ABCG1P45844 678 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 NFE2L1Q14494 772 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 EFTUD2Q15029 972 aaKnown RBP eCLIP15.71■□□□□ 0.11
CLN6-216ENST00000636876 EMBQ6PCB8 327 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 XKR5Q6UX68 686 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 FAM83HQ6ZRV2 1179 aaPredicted RBP15.71■□□□□ 0.11
CLN6-216ENST00000636876 KRT222Q8N1A0 295 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 FAM46DQ8NEK8 389 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 UHMK1Q8TAS1 419 aaKnown RBP15.71■□□□□ 0.11
CLN6-216ENST00000636876 PANX3Q96QZ0 392 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 CPNE1Q99829 537 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 AARSD1Q9BTE6 412 aaKnown RBP15.71■□□□□ 0.11
CLN6-216ENST00000636876 EPB41L4BQ9H329 900 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 SPATS2LQ9NUQ6 558 aaKnown RBP15.71■□□□□ 0.11
CLN6-216ENST00000636876 FAM8A1Q9UBU6 413 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 TBC1D29Q9UFV1 150 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 CORO1CQ9ULV4 474 aaPredicted RBP15.71■□□□□ 0.11
CLN6-216ENST00000636876 BTBD3Q9Y2F9 522 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 COMMD10Q9Y6G5 202 aa15.71■□□□□ 0.11
CLN6-216ENST00000636876 MED19A0JLT2 244 aaPredicted RBP15.7■□□□□ 0.1
CLN6-216ENST00000636876 TRIM38O00635 465 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 NIPSNAP2O75323 286 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 IDSP22304 550 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 CCR7P32248 378 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 GP5P40197 560 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 CSE1LP55060 971 aaKnown RBP15.7■□□□□ 0.1
CLN6-216ENST00000636876 ILF2Q12905 390 aaKnown RBP15.7■□□□□ 0.1
CLN6-216ENST00000636876 METRNLQ641Q3 311 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 ZC3HC1Q86WB0 502 aaKnown RBP15.7■□□□□ 0.1
CLN6-216ENST00000636876 LILRA3Q8N6C8 439 aaPredicted RBP15.7■□□□□ 0.1
CLN6-216ENST00000636876 EID2Q8N6I1 236 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 NETO1Q8TDF5 533 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 ELMO1Q92556 727 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 CAVIN3Q969G5 261 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 MCMBPQ9BTE3 642 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 DUSP23Q9BVJ7 150 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 RHOJQ9H4E5 214 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 COG4Q9H9E3 785 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 TXNDC16Q9P2K2 825 aa15.7■□□□□ 0.1
CLN6-216ENST00000636876 A6NCN8 305 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 B4DGG1 531 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 LIN7AO14910 233 aaPredicted RBP15.69■□□□□ 0.1
CLN6-216ENST00000636876 SIGLEC6O43699 453 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 SH3BP5O60239 455 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 SNX2O60749 519 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 EML2O95834 649 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 AOAHP28039 575 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 KLHL38Q2WGJ6 581 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 C6orf132Q5T0Z8 1188 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 RBM20Q5T481 1227 aaKnown RBP15.69■□□□□ 0.1
CLN6-216ENST00000636876 AGAP9Q5VTM2 703 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 OGFOD3Q6PK18 319 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 WASH2PQ6VEQ5 465 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 NAXDQ8IW45 347 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 CFAP206Q8IYR0 622 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 SETD7Q8WTS6 366 aaKnown RBP15.69■□□□□ 0.1
CLN6-216ENST00000636876 ZDHHC1Q8WTX9 485 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 KCNJ9Q92806 393 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 NDNQ99608 321 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 DPEP2Q9H4A9 486 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 WASH6PQ9NQA3 447 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 PRDM8Q9NQV8 689 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 PCOLCE2Q9UKZ9 415 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 ACSL5Q9ULC5 683 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 MED16Q9Y2X0 877 aa15.69■□□□□ 0.1
CLN6-216ENST00000636876 SLC5A10A0PJK1 596 aa15.68■□□□□ 0.1
CLN6-216ENST00000636876 PDZK1P1A8MUH7 402 aa15.68■□□□□ 0.1
CLN6-216ENST00000636876 E5RI56 91 aa15.68■□□□□ 0.1
CLN6-216ENST00000636876 KPNA5O15131 536 aa15.68■□□□□ 0.1
CLN6-216ENST00000636876 CTIFO43310 598 aaKnown RBP15.68■□□□□ 0.1
CLN6-216ENST00000636876 CHRM3P20309 590 aa15.68■□□□□ 0.1
CLN6-216ENST00000636876 RPA4Q13156 261 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms