RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SPIDRQ14159 915 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 PIGHQ14442 188 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TRIP13Q15645 432 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 KYNUQ16719 465 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CDO1Q16878 200 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ISXQ2M1V0 245 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CCDC38Q502W7 563 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TXNRD3NBQ6F5E7 133 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 DNAJC24Q6P3W2 148 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CEP128Q6ZU80 1094 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 FAM183BPQ6ZVS7 135 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 UBE2R2Q712K3 238 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 POLNQ7Z5Q5 900 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CPLX4Q7Z7G2 160 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CDH24Q86UP0 819 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 IQCHQ86VS3 1027 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TDRPQ86YL5 185 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 LSMEM2Q8N112 164 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 RIBC1Q8N443 379 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 KDM1BQ8NB78 822 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 GLIS1Q8NBF1 620 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TMEM35BQ8NCS4 154 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CCDC197Q8NCU1 140 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 EXTL1Q92935 676 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ARHGEF2Q92974 986 aaKnown RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 AZIN2Q96A70 460 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 FEM1CQ96JP0 617 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ZNF578Q96N58 590 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TRIM62Q9BVG3 475 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SLC17A9Q9BYT1 436 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ATP13A1Q9HD20 1204 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 APOBEC3BQ9UH17 382 aaKnown RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 DNPEPQ9ULA0 475 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SLC12A4Q9UP95 1085 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ZFR2Q9UPR6 939 aaKnown RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 DRG1Q9Y295 367 aaKnown RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 UTP20O75691 2785 aaKnown RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 DOPEY1Q5JWR5 2465 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CACNA1DQ01668 2161 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CCDC168Q8NDH2 2452 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TMEM120BA0PK00 339 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CCT8L1PA6NM43 557 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 H3BM21 787 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 AURKAO14965 403 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 AQP9O43315 295 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CLDN11O75508 207 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 KRT1P04264 644 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 UGT2B4P06133 528 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 GSTA1P08263 222 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CKMT1AP12532 417 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ECI1P42126 302 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 RHDQ02161 417 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SRSF6Q13247 344 aaKnown RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 XRCC4Q13426 336 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SLC12A1Q13621 1099 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ZNF284Q2VY69 593 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 HP1BP3Q5SSJ5 553 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TPRG1LQ5T0D9 272 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 FAXCQ5TGI0 409 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 C22orf39Q6P5X5 142 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 GCNT7Q6ZNI0 430 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CHST15Q7LFX5 561 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 KANSL1Q7Z3B3 1105 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 PARGQ86W56 976 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TRIM69Q86WT6 500 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 FAM131BQ86XD5 332 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ARL14Q8N4G2 192 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ARFGAP1Q8N6T3 406 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 Q8N9G6 341 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SLC35B2Q8TB61 432 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 FNIP1Q8TF40 1166 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CKAP2Q8WWK9 683 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 MAML1Q92585 1016 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 PPP1R16AQ96I34 528 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 MCEEQ96PE7 176 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 FAM118BQ9BPY3 351 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 WRAP53Q9BUR4 548 aaKnown RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 PREBQ9HCU5 417 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 OXSMQ9NWU1 459 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 IL36AQ9UHA7 158 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SVILO95425 2214 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 MTORP42345 2549 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 B8ZZF3 427 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 FPGTO14772 594 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SLC7A4O43246 635 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SNX3O60493 162 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CDH16O75309 829 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TJP3O95049 919 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ANXA6P08133 673 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 FAM87AP0C7U9 286 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 C6P13671 934 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 VPS41P49754 854 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CCNHP51946 323 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 UCNP55089 124 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 OXCT1P55809 520 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CYP4F2P78329 520 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 DEUP1Q05D60 604 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 GTF2H3Q13889 308 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 MORF4L2Q15014 288 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 RASA2Q15283 850 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms