RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 FAM131CQ96AQ9 280 aa9.79□□□□□ -0.84
SOX2-OT-244ENST00000627738 GRAMD1AQ96CP6 724 aa9.79□□□□□ -0.84
SOX2-OT-244ENST00000627738 LINGO1Q96FE5 620 aa9.79□□□□□ -0.84
SOX2-OT-244ENST00000627738 SIPA1Q96FS4 1042 aa9.79□□□□□ -0.84
SOX2-OT-244ENST00000627738 SEC16BQ96JE7 1060 aa9.79□□□□□ -0.84
SOX2-OT-244ENST00000627738 PANX3Q96QZ0 392 aa9.79□□□□□ -0.84
SOX2-OT-244ENST00000627738 SPATS2LQ9NUQ6 558 aaKnown RBP9.79□□□□□ -0.84
SOX2-OT-244ENST00000627738 MBD1Q9UIS9 605 aaPredicted RBP9.79□□□□□ -0.84
SOX2-OT-244ENST00000627738 IKZF3Q9UKT9 509 aa9.79□□□□□ -0.84
SOX2-OT-244ENST00000627738 CNOT6Q9ULM6 557 aaKnown RBP9.79□□□□□ -0.84
SOX2-OT-244ENST00000627738 MMP17Q9ULZ9 603 aa9.79□□□□□ -0.84
SOX2-OT-244ENST00000627738 F5P12259 2224 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 TCRBV21S2A2A0A5A6 115 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 NPEPPSL1A6NEC2 478 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 ERICH4A6NGS2 130 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 A8MT66 165 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 F8W8V4 182 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 CDC7O00311 574 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 BTN3A1O00481 513 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 PLRG1O43660 514 aaKnown RBP9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 ITM2AO43736 263 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 SGTAO43765 313 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 SNX3O60493 162 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 LYPLA1O75608 230 aaPredicted RBP9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 AP2A2O94973 939 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 CHRNB1P11230 501 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 ACADMP11310 421 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 GRK2P25098 689 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 SLC1A6P48664 564 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 PRKAA2P54646 552 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 PSMA6P60900 246 aaKnown RBP9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 OCRLQ01968 901 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 PRKCQQ04759 706 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 ZBTB16Q05516 673 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 ZP2Q05996 745 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 OVGP1Q12889 678 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 TMEM115Q12893 351 aaPredicted RBP9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 TTC31Q49AM3 519 aaPredicted RBP9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 SEL1L3Q68CR1 1132 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 KIAA1324Q6UXG2 1013 aaKnown RBP9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 ZNF852Q6ZMS4 543 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 Q6ZS52 159 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 PIWIL4Q7Z3Z4 852 aaKnown RBP9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 SPATA21Q7Z572 469 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 TRIM74Q86UV6 250 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 PHYKPLQ8IUZ5 450 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 ADHFE1Q8IWW8 467 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 PLA2G15Q8NCC3 412 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 OR6Y1Q8NGX8 325 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 RHEBL1Q8TAI7 183 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 EXT2Q93063 718 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 KIAA1191Q96A73 305 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 MOCOSQ96EN8 888 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 THOC1Q96FV9 657 aaKnown RBP9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 MRGPRX1Q96LB2 322 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 C7orf26Q96N11 449 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 GATA5Q9BWX5 397 aaPredicted RBP9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 C20orf27Q9GZN8 174 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 CYP4F12Q9HCS2 524 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 ACSS2Q9NR19 701 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 ARHGEF3Q9NR81 526 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 LATS2Q9NRM7 1088 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 THAP1Q9NVV9 213 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 KCTD5Q9NXV2 234 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 SCML1Q9UN30 329 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 ZFR2Q9UPR6 939 aaKnown RBP9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 NCKAP1Q9Y2A7 1128 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 HRH3Q9Y5N1 445 aa9.78□□□□□ -0.84
SOX2-OT-244ENST00000627738 PRUNE2Q8WUY3 3088 aa9.77□□□□□ -0.84
SOX2-OT-244ENST00000627738 PRR23AA6NEV1 266 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 OR2AG2A6NM03 316 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 TMEM114B3SHH9 223 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 UBXN8O00124 270 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 MAGEC1O60732 1142 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 KERAO60938 352 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 RNGTTO60942 597 aaKnown RBP9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 SMIM24O75264 130 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 H2AFYO75367 372 aaKnown RBP9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 PCCBP05166 539 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 DGKAP23743 735 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 TARSP26639 723 aaKnown RBP9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 CCR7P32248 378 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 RGS4P49798 205 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 CTSCP53634 463 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 ADPRHP54922 357 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 DNAJB13P59910 316 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 ABCE1P61221 599 aaKnown RBP9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 RPS21P63220 83 aaKnown RBP9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 ASPHQ12797 758 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 FGL2Q14314 439 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 TSNQ15631 228 aaKnown RBP9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 CRY1Q16526 586 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 WSCD2Q2TBF2 565 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 TTLL9Q3SXZ7 439 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 ACSBG2Q5FVE4 666 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 KIAA1161Q6NSJ0 714 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 PNCKQ6P2M8 343 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 FOXR1Q6PIV2 292 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 TMEM220Q6QAJ8 160 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 ATG14Q6ZNE5 492 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms