RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 PDHA1P08559 390 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 ATP6V1E1P36543 226 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 ZNF77Q15935 545 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 CYP51A1Q16850 503 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 LEXMQ3ZCV2 418 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 PACS1Q6VY07 963 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 PARS2Q7L3T8 475 aaKnown RBP8.96□□□□□ -0.98
HDAC9-229ENST00000622668 FSTL5Q8N475 847 aaPredicted RBP8.96□□□□□ -0.98
HDAC9-229ENST00000622668 RUBCNQ92622 972 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 ASB2Q96Q27 587 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 MIPEPQ99797 713 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 RETREG1Q9H6L5 497 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 PISDQ9UG56 409 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 SLC6A14Q9UN76 642 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 SOX13Q9UN79 622 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 A8MUA0 341 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 SERPINI2O75830 405 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 ITGB7P26010 798 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 CCNFP41002 786 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 SUOXP51687 545 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 HYAL2Q12891 473 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 SLC9A5Q14940 896 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 KIAA0895LQ68EN5 471 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 LRRC57Q8N9N7 239 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 SMRP1Q8NCR6 262 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 ZDHHC1Q8WTX9 485 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 PRRX2Q99811 253 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 RDH14Q9HBH5 336 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 TAC3Q9UHF0 121 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 BAIAP2L1Q9UHR4 511 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 PLAGL1Q9UM63 463 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 CNTN6Q9UQ52 1028 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 ZNF780BQ9Y6R6 833 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 MUC6Q6W4X9 2439 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 GYG2O15488 501 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 ATP8B1O43520 1251 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 OTCP00480 354 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 EEF1DP29692 281 aaKnown RBP8.95□□□□□ -0.98
HDAC9-229ENST00000622668 ACSL1P33121 698 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 ERFP50548 548 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 CHIT1Q13231 466 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 ITIH4Q14624 930 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 CCDC153Q494R4 210 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 LILRA6Q6PI73 481 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 NPWQ8N729 165 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 TRIML2Q8N7C3 387 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 CEP76Q8TAP6 659 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 MDM1Q8TC05 714 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 HM13Q8TCT9 377 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 TCP10LQ8TDR4 215 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 NAT6Q93015 286 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 PMEPA1Q969W9 287 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 GRAMD1AQ96CP6 724 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 VCX3BQ9H321 246 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 PDE7BQ9NP56 450 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 SNX15Q9NRS6 342 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 V9GYQ6 96 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 ARFGEF1Q9Y6D6 1849 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 GNAZP19086 355 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 NT5EP21589 574 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 BGNP21810 368 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 TCEA1P23193 301 aaKnown RBP8.95□□□□□ -0.98
HDAC9-229ENST00000622668 ATP5F1P24539 256 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-229ENST00000622668 GRK2P25098 689 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 P2RY2P41231 377 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 CLK3P49761 638 aaKnown RBP8.95□□□□□ -0.98
HDAC9-229ENST00000622668 TPMTP51580 245 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 GUCY1A3Q02108 690 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 SCAPQ12770 1279 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 TCTN1Q2MV58 587 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 NXPE1Q8N323 547 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 SYNPOQ8N3V7 929 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 APOOQ9BUR5 198 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 TDRD1Q9BXT4 1180 aaKnown RBP8.95□□□□□ -0.98
HDAC9-229ENST00000622668 PRRG4Q9BZD6 226 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 DMTF1Q9Y222 760 aa8.95□□□□□ -0.98
HDAC9-229ENST00000622668 ASCC3Q8N3C0 2202 aaKnown RBP8.95□□□□□ -0.98
HDAC9-229ENST00000622668 PEX11AO75192 247 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 EPOP01588 193 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 EPORP19235 508 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 TARSP26639 723 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 HOXC13P31276 330 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 RPS15P62841 145 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 TSNQ15631 228 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 RAB41Q5JT25 222 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 KIAA0930Q6ICG6 404 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 ZNF621Q6ZSS3 439 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 KIAA0408Q6ZU52 694 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SPATA24Q86W54 205 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 PLXDC1Q8IUK5 500 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 C1orf210Q8IVY1 113 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 KIAA2013Q8IYS2 634 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 MPP5Q8N3R9 675 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 METTL27Q8N6F8 245 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 KCT2Q8NC54 265 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SMPDL3AQ92484 453 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SCRN2Q96FV2 425 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 DUSP23Q9BVJ7 150 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 FBRSL1Q9HCM7 1045 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 THAP10Q9P2Z0 257 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms