RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 GNGT2O14610 69 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 ZW10O43264 779 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 ICMTO60725 284 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 FYNP06241 537 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 ZNF286BP0CG31 522 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 DDOSTP39656 456 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 RPL34P49207 117 aaKnown RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 CLK1P49759 484 aaKnown RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 CLK3P49761 638 aaKnown RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 STAT5BP51692 787 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 OR2B6P58173 313 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 CDK5R2Q13319 367 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 GRB7Q14451 532 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 KCNA10Q16322 511 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 COLEC12Q5KU26 742 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 KIAA0930Q6ICG6 404 aaPredicted RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 CXCL17Q6UXB2 119 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 GALNT12Q8IXK2 581 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 RAVER1Q8IY67 606 aaKnown RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 EID3Q8N140 333 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 METTL4Q8N3J2 472 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 GIPC2Q8TF65 315 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 CLEC4CQ8WTT0 213 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 FIG4Q92562 907 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 POP5Q969H6 163 aaKnown RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 RMDN1Q96DB5 314 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 RPL10LQ96L21 214 aaKnown RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 PPP1R2P1Q96PQ5 205 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 GPR20Q99678 358 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 ZBED2Q9BTP6 218 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 PRKD2Q9BZL6 878 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 DCSTAMPQ9H295 470 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 SMURF2Q9HAU4 748 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 OGDHLQ9ULD0 1010 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 PCDHGA10Q9Y5H3 936 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 MAU2Q9Y6X3 613 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 NRCAMQ92823 1304 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 METTL15A6NJ78 407 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 BCKDKO14874 412 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 CST1P01037 141 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 CYP11A1P05108 521 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 ASGR1P07306 291 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 ITGAMP11215 1152 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 LCP1P13796 627 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 ERCC2P18074 760 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 RRM2P31350 389 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 IFNA8P32881 189 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 HTR3AP46098 478 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 HCAR3P49019 387 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 CLCNKBP51801 687 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 OR4D2P58180 307 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 SLC35A2P78381 396 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 IL5RAQ01344 420 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 FCHO2Q0JRZ9 810 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 NPTX1Q15818 432 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 UNC50Q53HI1 259 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 BRMS1LQ5PSV4 323 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 EFL1Q7Z2Z2 1120 aaKnown RBP10.68□□□□□ -0.7
UPF3A-212ENST00000619079 UNC93AQ86WB7 457 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 ADHFE1Q8IWW8 467 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 KLHDC8BQ8IXV7 354 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 TMEM192Q8IY95 271 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 HSFY1Q96LI6 401 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 CCDC115Q96NT0 180 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 TMEM246Q9BRR3 403 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 ALOXE3Q9BYJ1 711 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 TRIM8Q9BZR9 551 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 OPTCQ9UBM4 332 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 POLG2Q9UHN1 485 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 RAPGEFL1Q9UHV5 662 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 MAGED1Q9Y5V3 778 aaPredicted RBP10.68□□□□□ -0.7
UPF3A-212ENST00000619079 C9JVG2 144 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 H3BMM5 538 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 AXIN1O15169 862 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 SLC22A3O75751 556 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 ANXA9O76027 345 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 CYBBP04839 570 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 TRAPPC2P0DI81 140 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 TRAPPC2BP0DI82 140 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 SPNP16150 400 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 EN2P19622 333 aaPredicted RBP10.68□□□□□ -0.7
UPF3A-212ENST00000619079 ARL1P40616 181 aaPredicted RBP10.68□□□□□ -0.7
UPF3A-212ENST00000619079 YBX1P67809 324 aaKnown RBP10.68□□□□□ -0.7
UPF3A-212ENST00000619079 SH3BP2P78314 561 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 DGCR6Q14129 220 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 EML3Q32P44 896 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 TPRG1LQ5T0D9 272 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 SIX5Q8N196 739 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 NAT16Q8N8M0 369 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 FCGR1BQ92637 280 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 TMEM74Q96NL1 305 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 SLC9A7Q96T83 725 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 DHRS9Q9BPW9 319 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 TBL1YQ9BQ87 522 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 SMOC2Q9H3U7 446 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 MID1IP1Q9NPA3 183 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 AIG1Q9NVV5 245 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 ERVK-18Q9QC07 812 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 DSEQ9UL01 958 aa10.68□□□□□ -0.7
UPF3A-212ENST00000619079 ASPDHA6ND91 283 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms