RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 FAM163BP0C2L3 166 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 ERVK-8P63133 956 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 NFKB2Q00653 900 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 FPGSQ05932 587 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 KCNA10Q16322 511 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 PRSS55Q6UWB4 352 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 FAM162AQ96A26 154 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 DERL2Q9GZP9 239 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 LHPPQ9H008 270 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 SPC25Q9HBM1 224 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 RIC8BQ9NVN3 520 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 ADGRE2Q9UHX3 823 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 ZSWIM8A7E2V4 1837 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 PRKD3O94806 890 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 MATN4O95460 622 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 ZFP36L2P47974 494 aaKnown RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 ZNF157P51786 506 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 NKG7Q16617 165 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 CPSF6Q16630 551 aaKnown RBP eCLIP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 AASDHQ4L235 1098 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 ARMC12Q5T9G4 340 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 PTRHD1Q6GMV3 140 aaKnown RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 GRAMD4Q6IC98 578 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 RNF19BQ6ZMZ0 732 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 BTLAQ7Z6A9 289 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 SLC15A4Q8N697 577 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 CGREF1Q99674 301 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 LRRC3Q9BY71 257 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 GPR63Q9BZJ6 419 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 NTN4Q9HB63 628 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 TLR8Q9NR97 1041 aaKnown RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 CIDEBQ9UHD4 219 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 AGO1Q9UL18 857 aaKnown RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 PCDHGA8Q9Y5G5 932 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 RPS17P08708 135 aaKnown RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 CCNA2P20248 432 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 FUT4P22083 530 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 CD300CQ08708 224 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 GTF2H3Q13889 308 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 SPIDRQ14159 915 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 SIM2Q14190 667 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 NR1D2Q14995 579 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 SPANXN4Q5MJ08 99 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 CTSL3PQ5NE16 218 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 ACBD5Q5T8D3 534 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 RTN4RL1Q86UN2 441 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 HID1Q8IV36 788 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 BBS5Q8N3I7 341 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 OR2T12Q8NG77 320 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 RHEBL1Q8TAI7 183 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 SNX19Q92543 992 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 PLEKHA8Q96JA3 519 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 ASB2Q96Q27 587 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 FCF1Q9Y324 198 aaKnown RBP13.86□□□□□ -0.19
COL6A1-207ENST00000612273 PCDHGA11Q9Y5H2 935 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 SLC30A1Q9Y6M5 507 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 MIA3Q5JRA6 1907 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 K7EPI3 171 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 E2F3O00716 465 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 DEAF1O75398 565 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-207ENST00000612273 BCL10O95999 233 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 C1QCP02747 245 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 OCM2P0CE71 109 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 OCMP0CE72 109 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-207ENST00000612273 THRBP10828 461 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 HOXD9P28356 352 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-207ENST00000612273 MLLT10P55197 1068 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 TRIP4Q15650 581 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-207ENST00000612273 CLLU1OSQ5K130 101 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 ZNF554Q86TJ5 538 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 SMYD1Q8NB12 490 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 DDHD1Q8NEL9 900 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 TBC1D15Q8TC07 691 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 CD200R1Q8TD46 325 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 OSCP1Q8WVF1 389 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 TANKQ92844 425 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 SYT17Q9BSW7 474 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 CIPCQ9C0C6 399 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 PKP3Q9Y446 797 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 SH3PXD2BA1X283 911 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 MYO1GB0I1T2 1018 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 G3V2T6 193 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 INSIG1O15503 277 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 SEC22BO75396 215 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 PRLP01236 227 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 FCGR1AP12314 374 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 MYCLP1P12525 358 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-207ENST00000612273 ELNP15502 786 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 LPOP22079 712 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-207ENST00000612273 CTGFP29279 349 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 NFE2Q16621 373 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-207ENST00000612273 PARP15Q460N3 678 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 FAM98BQ52LJ0 330 aaKnown RBP13.85□□□□□ -0.19
COL6A1-207ENST00000612273 CCNYL2Q5T2Q4 361 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 SPRED1Q7Z699 444 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 TEX26Q8N6G2 289 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 DUS3LQ96G46 650 aaKnown RBP13.85□□□□□ -0.19
COL6A1-207ENST00000612273 TLR9Q9NR96 1032 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 SEPT3Q9UH03 358 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 GABRQQ9UN88 632 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms