RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 C9orf72Q96LT7 481 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 ARHGAP9Q9BRR9 750 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 ZPBPQ9BS86 351 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 ERI2A8K979 691 aaKnown RBP18.82■□□□□ 0.6
CTSA-217ENST00000607482 LIASO43766 372 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 ATP1B2P14415 290 aaPredicted RBP18.82■□□□□ 0.6
CTSA-217ENST00000607482 GFERP55789 205 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 MC2RQ01718 297 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 C19orf57Q0VDD7 668 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 LAMB3Q13751 1172 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 COL9A2Q14055 689 aaPredicted RBP18.82■□□□□ 0.6
CTSA-217ENST00000607482 SKIDA1Q1XH10 827 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 METRNLQ641Q3 311 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 DENND5AQ6IQ26 1287 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 FAM83HQ6ZRV2 1179 aaPredicted RBP18.82■□□□□ 0.6
CTSA-217ENST00000607482 ARHGAP22Q7Z5H3 698 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 OR2L2Q8NH16 312 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 KIAA1143Q96AT1 154 aaPredicted RBP18.82■□□□□ 0.6
CTSA-217ENST00000607482 C12orf66Q96MD2 445 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 WWP1Q9H0M0 922 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 CFAP20Q9Y6A4 193 aaKnown RBP18.82■□□□□ 0.6
CTSA-217ENST00000607482 COLEC10Q9Y6Z7 277 aa18.82■□□□□ 0.6
CTSA-217ENST00000607482 CCDC78A2IDD5 438 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 EFSO43281 561 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 LDB2O43679 373 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 MTHFD1P11586 935 aaKnown RBP18.81■□□□□ 0.6
CTSA-217ENST00000607482 FDFT1P37268 417 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 CAPZBP47756 277 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 CDH17Q12864 832 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 MEI1Q5TIA1 1274 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 CACHD1Q5VU97 1274 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 KCTD11Q693B1 232 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 FAM92BQ6ZTR7 304 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 LRRC8AQ8IWT6 810 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 CACNA2D3Q8IZS8 1091 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 STYXQ8WUJ0 223 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 MAIP1Q8WWC4 291 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.81■□□□□ 0.6
CTSA-217ENST00000607482 TTC1Q99614 292 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 C19orf43Q9BQ61 176 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 CCM2Q9BSQ5 444 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 FBXO8Q9NRD0 319 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 RAB6BQ9NRW1 208 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 NLE1Q9NVX2 485 aaPredicted RBP18.81■□□□□ 0.6
CTSA-217ENST00000607482 SCN8AQ9UQD0 1980 aa18.81■□□□□ 0.6
CTSA-217ENST00000607482 MN1Q10571 1320 aaPredicted RBP18.8■□□□□ 0.6
CTSA-217ENST00000607482 IFRD1O00458 451 aaPredicted RBP18.8■□□□□ 0.6
CTSA-217ENST00000607482 TOX3O15405 576 aaPredicted RBP18.8■□□□□ 0.6
CTSA-217ENST00000607482 CA5AP35218 305 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 XIAPP98170 497 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 CACNG1Q06432 222 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 BCL7AQ4VC05 210 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 CYB5D1Q6P9G0 228 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 TRIM58Q8NG06 486 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 OR52K1Q8NGK4 314 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 NAT14Q8WUY8 206 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 RSC1A1Q92681 617 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 PMEPA1Q969W9 287 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 ETNK1Q9HBU6 452 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 ZDHHC3Q9NYG2 299 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 SMARCAL1Q9NZC9 954 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 SSUH2Q9Y2M2 353 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 HEBP2Q9Y5Z4 205 aa18.8■□□□□ 0.6
CTSA-217ENST00000607482 UBA6A0AVT1 1052 aaPredicted RBP18.79■□□□□ 0.6
CTSA-217ENST00000607482 PRR19A6NJB7 356 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.79■□□□□ 0.6
CTSA-217ENST00000607482 RAD1O60671 282 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 PRB1P04280 392 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 ANKRD34CP0C6C1 535 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 LEPRP48357 1165 aaKnown RBP18.79■□□□□ 0.6
CTSA-217ENST00000607482 CCDC38Q502W7 563 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 SERPINA9Q86WD7 417 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 DTX1Q86Y01 620 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 RASGRP3Q8IV61 690 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 NLGN4XQ8N0W4 816 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 NLGN4YQ8NFZ3 816 aaPredicted RBP18.79■□□□□ 0.6
CTSA-217ENST00000607482 HM13Q8TCT9 377 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 SNRNP27Q8WVK2 155 aaKnown RBP18.79■□□□□ 0.6
CTSA-217ENST00000607482 NKD1Q969G9 470 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 CDKN2AIPNLQ96HQ2 116 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 ELMO2Q96JJ3 720 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 OGFRQ9NZT2 677 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 PAK5Q9P286 719 aa18.79■□□□□ 0.6
CTSA-217ENST00000607482 HEATR9A2RTY3 570 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 F8W8V4 182 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 C9P02748 559 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 APRTP07741 180 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 MSNP26038 577 aaKnown RBP18.78■□□□□ 0.6
CTSA-217ENST00000607482 ACRV1P26436 265 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 MAP4P27816 1152 aaKnown RBP18.78■□□□□ 0.6
CTSA-217ENST00000607482 PRKAA1Q13131 559 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 SRSF6Q13247 344 aaKnown RBP18.78■□□□□ 0.6
CTSA-217ENST00000607482 DNTTIP2Q5QJE6 756 aaKnown RBP18.78■□□□□ 0.6
CTSA-217ENST00000607482 OOSP2Q86WS3 158 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 BMPERQ8N8U9 685 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 GPR150Q8NGU9 434 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 RTP4Q96DX8 246 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 WBP1Q96G27 269 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 OR6C1Q96RD1 312 aa18.78■□□□□ 0.6
CTSA-217ENST00000607482 FERD3LQ96RJ6 166 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms