RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 LYPLA1O75608 230 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEMA3DO95025 777 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 VAPBO95292 243 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 NADKO95544 446 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 LSM8O95777 96 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 GOT2P00505 430 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 APOA1P02647 267 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CHRNA1P02708 482 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 AMHP03971 560 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 HMGN1P05114 100 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 GNAO1P09471 354 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ENO3P13929 434 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ITGA2P17301 1181 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CD58P19256 250 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CHRM3P20309 590 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ACO1P21399 889 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CD9P21926 228 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 BDNFP23560 247 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 IL4RP24394 825 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 FPR2P25090 351 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 HLA-DMAP28067 261 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 HTR1BP28222 390 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 AXLP30530 894 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 RYKP34925 604 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 HSPA1LP34931 641 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PTGS2P35354 604 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SREBF1P36956 1147 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC26A3P40879 764 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 MAGEA11P43364 429 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PTPN9P43378 593 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CBX5P45973 191 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 RPS9P46781 194 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC6A11P48066 632 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 HCAR3P49019 387 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 MRPL19P49406 292 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 RGS7P49802 495 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SELENOPP49908 381 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CSRP3P50461 194 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYP2J2P51589 502 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 GTF2A2P52657 109 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TPD52P55327 224 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PKNOX1P55347 436 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 DEFA1P59665 94 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 DEFA3P59666 94 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 RPL10AP62906 217 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 GSTO1P78417 241 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CHRNDQ07001 517 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 FOXM1Q08050 763 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF543Q08ER8 600 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 INCA1Q0VD86 236 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 COX10Q12887 443 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 GRM1Q13255 1194 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TNK1Q13470 666 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 IL18R1Q13478 541 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 BFSP2Q13515 415 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEMA5AQ13591 1074 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 DNASE1L3Q13609 305 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 RIN1Q13671 783 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 KCNC3Q14003 757 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TFDP2Q14188 446 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ICAM4Q14773 271 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 STARD3Q14849 445 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 NOMO1Q15155 1222 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 UBE2SQ16763 222 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 HADHQ16836 314 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PLEKHG6Q3KR16 790 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PARP15Q460N3 678 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZFP69Q49AA0 526 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ATP13A4Q4VNC1 1196 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 COQ5Q5HYK3 327 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZC3H12BQ5HYM0 836 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CRB2Q5IJ48 1285 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 C6orf141Q5SZD1 244 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 GRTP1Q5TC63 336 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PIK3R6Q5UE93 754 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 UBE2UQ5VVX9 321 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEL1L3Q68CR1 1132 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 KIAA1211LQ6NV74 962 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TATDN1Q6P1N9 297 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 NEK5Q6P3R8 708 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CRIP3Q6Q6R5 217 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 VHLLQ6RSH7 139 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 B3GNT9Q6UX72 402 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CCBE1Q6UXH8 406 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ISLR2Q6UXK2 745 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 GDPD3Q7L5L3 318 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 OTOP1Q7RTM1 612 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 OTOP3Q7RTS5 596 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 DGLUCYQ7Z3D6 616 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 GALNT7Q86SF2 657 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CLEC14AQ86T13 490 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 NOXA1Q86UR1 476 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PTRH1Q86Y79 214 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 EPHX4Q8IUS5 362 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 C10orf107Q8IVU9 208 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 UNC45BQ8IWX7 931 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TCTE3Q8IZS6 198 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SYNE4Q8N205 404 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PELI3Q8N2H9 469 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ARHGEF39Q8N4T4 335 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms