RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 PSMD13Q9UNM6 376 aa11.48□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PADI2Q9Y2J8 665 aa11.48□□□□□ -0.57
PDLIM1P1-201ENST00000604187 CROCCQ5TZA2 2017 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 OR6C74A6NCV1 312 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ANKRD66B4E2M5 251 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 C9J4A7 227 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 MASP2O00187 686 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 MFSD11O43934 449 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 IPO13O94829 963 aaKnown RBP11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 HLA-DQB2P05538 268 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PIRTP0C851 137 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ATP1A3P13637 1013 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ARCN1P48444 511 aaKnown RBP11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 GALNT3Q14435 633 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 KRT31Q15323 416 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PDPK2PQ6A1A2 396 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ARMC6Q6NXE6 501 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 SPOCD1Q6ZMY3 1216 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 FJX1Q86VR8 437 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 OOSP2Q86WS3 158 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 LRRC49Q8IUZ0 686 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 NEK11Q8NG66 645 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 OR1L3Q8NH93 324 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 GRHL3Q8TE85 626 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 MAML1Q92585 1016 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 FER1L6-AS2Q96M78 137 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 WDR77Q9BQA1 342 aaPredicted RBP11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ZFYVE1Q9HBF4 777 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PCDH18Q9HCL0 1135 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 HAUS2Q9NVX0 235 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 NOVA2Q9UNW9 492 aaKnown RBP11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 SHOC2Q9UQ13 582 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 BTRCQ9Y297 605 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 CSAG2Q9Y5P2 127 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 SPG11Q96JI7 2443 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ABCA2Q9BZC7 2435 aa11.47□□□□□ -0.57
PDLIM1P1-201ENST00000604187 SLC9B1P1A6NJY1 282 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 TMEM150CB9EJG8 249 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PEX12O00623 359 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 MATN3O15232 486 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 LDB2O43679 373 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 KLHL41O60662 606 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 TPM2P07951 284 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 SNRPB2P08579 225 aaKnown RBP11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 RARAP10276 462 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 EDN3P14138 238 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PTGER4P35408 488 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PCK1P35558 622 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 CD86P42081 329 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 KPNA2P52292 529 aaKnown RBP11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 GALNT2Q10471 571 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 GTF2H3Q13889 308 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 BOLA3Q53S33 107 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ZNF789Q5FWF6 425 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 DUS1LQ6P1R4 473 aaKnown RBP11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 FAM83HQ6ZRV2 1179 aaPredicted RBP11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 CARFQ8N187 725 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 GDAP1Q8TB36 358 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 LRRN4Q8WUT4 740 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 IP6K3Q96PC2 410 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 TRAPPC9Q96Q05 1148 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ADGRE3Q9BY15 652 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 SLC7A5P2Q9GIP4 190 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 RAD18Q9NS91 495 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 NFKBIL1Q9UBC1 381 aaPredicted RBP11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 TMPRSS11EQ9UL52 423 aa11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 CFAP20Q9Y6A4 193 aaKnown RBP11.46□□□□□ -0.57
PDLIM1P1-201ENST00000604187 NIPBLQ6KC79 2804 aaeCLIP11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 A0A1B0GUH1 482 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 KLF7O75840 302 aaPredicted RBP11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 IGHEP01854 428 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 MMP2P08253 660 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 STSP08842 583 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 MTHFD1P11586 935 aaKnown RBP11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 HLA-DPA1P20036 260 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 PREPP48147 710 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 XRCC4Q13426 336 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 HIF1AQ16665 826 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 TXNRD3NBQ6F5E7 133 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 TIGD7Q6NT04 549 aaPredicted RBP11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 PPP1R2P3Q6NXS1 205 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 AMZ2Q86W34 360 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 FAR1Q8WVX9 515 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 DPH2Q9BQC3 489 aaPredicted RBP11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 SYT11Q9BT88 431 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 DHRS4Q9BTZ2 278 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 P4HTMQ9NXG6 502 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 AMACRQ9UHK6 382 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 ZNF711Q9Y462 761 aa11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 KLF2Q9Y5W3 355 aaPredicted RBP11.45□□□□□ -0.58
PDLIM1P1-201ENST00000604187 PCSK5Q92824 1860 aa11.44□□□□□ -0.58
PDLIM1P1-201ENST00000604187 POP7O75817 140 aaKnown RBP11.44□□□□□ -0.58
PDLIM1P1-201ENST00000604187 COX6B1P14854 86 aa11.44□□□□□ -0.58
PDLIM1P1-201ENST00000604187 FERP16591 822 aa11.44□□□□□ -0.58
PDLIM1P1-201ENST00000604187 BPIP17213 487 aa11.44□□□□□ -0.58
PDLIM1P1-201ENST00000604187 AGXTP21549 392 aa11.44□□□□□ -0.58
PDLIM1P1-201ENST00000604187 CDH3P22223 829 aa11.44□□□□□ -0.58
PDLIM1P1-201ENST00000604187 HADHAP40939 763 aa11.44□□□□□ -0.58
PDLIM1P1-201ENST00000604187 FOLR3P41439 243 aa11.44□□□□□ -0.58
PDLIM1P1-201ENST00000604187 TSFMP43897 325 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms