RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 HHEXQ03014 270 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 CAV1Q03135 178 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 PDIA2Q13087 525 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 SPANXN3Q5MJ09 141 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 RNF187Q5TA31 235 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 HES3Q5TGS1 186 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 AGAP9Q5VTM2 703 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 ZNF449Q6P9G9 518 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 ABRAXAS1Q6UWZ7 409 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 WASH2PQ6VEQ5 465 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 CCNJLQ8IV13 435 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 CFAP206Q8IYR0 622 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 GALNT15Q8N3T1 639 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 Q8N9G6 341 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 AVL9Q8NBF6 648 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 GPR150Q8NGU9 434 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 TSSK1BQ9BXA7 367 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 WASH6PQ9NQA3 447 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 GRHL1Q9NZI5 618 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 RABGEF1Q9UJ41 708 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 ACSL5Q9ULC5 683 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 PSMD13Q9UNM6 376 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 C17orf113A0A1B0GUU1 675 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 ZW10O43264 779 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 TOP3BO95985 862 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 VIPP01282 170 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 PROS1P07225 676 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 FASLGP48023 281 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 PLTPP55058 493 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 INSM1Q01101 510 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 TYSND1Q2T9J0 566 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 DNTTIP2Q5QJE6 756 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 METRNLQ641Q3 311 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 ZNF470Q6ECI4 717 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 PTRHD1Q6GMV3 140 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 UNQ6494/PRO21346Q6UXR6 183 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 CENPUQ71F23 418 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 KCNMB4Q86W47 210 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 ANKMY2Q8IV38 441 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 IGDCC3Q8IVU1 814 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 NOA1Q8NC60 698 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 WDR48Q8TAF3 677 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 GABPB2Q8TAK5 448 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 CALML6Q8TD86 181 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 CXorf40BQ96DE9 158 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 TCF12Q99081 682 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 CARD6Q9BX69 1037 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 COG4Q9H9E3 785 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 SARS2Q9NP81 518 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 SCHIP1Q9P0W5 487 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 CPNE7Q9UBL6 633 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 ZC3H7BQ9UGR2 993 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 TEX264Q9Y6I9 313 aa19.28■□□□□ 0.68
SHKBP1-214ENST00000597396 C1QTNF9BB2RNN3 333 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 PPM1DO15297 605 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 SLC35G4P0C7Q5 338 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 C1QTNF9P0C862 333 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 BRAFP15056 766 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 ALDH4A1P30038 563 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 PPM1FP49593 454 aaPredicted RBP19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 EIF3BP55884 814 aaKnown RBP19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 CLDN6P56747 220 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 TMPRSS12Q86WS5 348 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 LRRC6Q86X45 466 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 LMNTD2Q8IXW0 634 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 ELMO1Q92556 727 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 SH3KBP1Q96B97 665 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 SLC38A3Q99624 504 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 FAM167BQ9BTA0 163 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 WWP1Q9H0M0 922 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 GNPTGQ9UJJ9 305 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 VPS9D1Q9Y2B5 631 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 WDR37Q9Y2I8 494 aa19.27■□□□□ 0.68
SHKBP1-214ENST00000597396 COL27A1Q8IZC6 1860 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 OR52A4PA6NMU1 304 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 E7ESA3 106 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 RPLP0P05388 317 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 JUPP14923 745 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 ITGB6P18564 788 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 XRCC1P18887 633 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 RPS3P23396 243 aaKnown RBP eCLIP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 SLC19A1P41440 591 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 GPR3P46089 330 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 CCL7P80098 99 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 GUCY2DQ02846 1103 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 BOP1Q14137 746 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 SPIDRQ14159 915 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 CLCA4Q14CN2 919 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 SYTL3Q4VX76 610 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 HSP90AA5PQ58FG0 334 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 UNC5AQ6ZN44 842 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 TMPRSS7Q7RTY8 843 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 ZNF438Q7Z4V0 828 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 SPRED1Q7Z699 444 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 ZNF761Q86XN6 746 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 CILP2Q8IUL8 1156 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 ZBED8Q8IZ13 594 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 LILRA3Q8N6C8 439 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 FBXO36Q8NEA4 188 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms