RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ZNF670Q9BS34 389 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 PDLIM7Q9NR12 457 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 OSGIN1Q9UJX0 560 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 SMIM30A4D0T7 59 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 H3BQ06 376 aaPredicted RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 I3L521 148 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 RGS20O76081 388 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 FKBP9O95302 570 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 KRT6AP02538 564 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 KRT6BP04259 564 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 CCNYL3P0C7X3 344 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 NFKB1P19838 968 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 CHRNB3Q05901 458 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 BTBD16Q32M84 506 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 ARMC4Q5T2S8 1044 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 ACOT1Q86TX2 421 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 TMEM135Q86UB9 458 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 SLC51BQ86UW2 128 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 LACC1Q8IV20 430 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 SIMC1Q8NDZ2 872 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 TOR1AIP2Q8NFQ8 470 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 TRMT61AQ96FX7 289 aaKnown RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 HOPXQ9BPY8 73 aaPredicted RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 CDADC1Q9BWV3 514 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 LHX5Q9H2C1 402 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 RHOJQ9H4E5 214 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 ZNF214Q9UL59 606 aaPredicted RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 TBC1D24Q9ULP9 559 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 BRCA2P51587 3418 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 METTL15A6NJ78 407 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 PLA2G6O60733 806 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 IPO13O94829 963 aaKnown RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 LYPLA2O95372 231 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 SLC15A1P46059 708 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 DEFA1P59665 94 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 DEFA3P59666 94 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 LRRC71Q8N4P6 559 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 MCPH1Q8NEM0 835 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 ISL2Q96A47 359 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 RERGLQ9H628 205 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 TMPRSS11EQ9UL52 423 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 HSPB11Q9Y547 144 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 SNX10Q9Y5X0 201 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 COL2A1P02458 1487 aaPredicted RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 ENPP3O14638 875 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 MLYCDO95822 493 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 MT-CYBP00156 380 aaPredicted RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 ARL4AP40617 200 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 DGKQP52824 942 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 NUDT6P53370 316 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 DBPQ10586 325 aaPredicted RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 CBX2Q14781 532 aaPredicted RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 DUSP7Q16829 419 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 SOWAHAQ2M3V2 549 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 TYSND1Q2T9J0 566 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 CELF3Q5SZQ8 465 aaKnown RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 Q6ZPB1 254 aaPredicted RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 DEDD2Q8WXF8 326 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 ST8SIA2Q92186 375 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 KHSRPQ92945 711 aaKnown RBP eCLIP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 KLRG1Q96E93 195 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 MLPHQ9BV36 600 aaPredicted RBP14.99□□□□□ -0.01
CIRBP-228ENST00000590347 VPS4AQ9UN37 437 aa14.99□□□□□ -0.01
CIRBP-228ENST00000590347 OR7A10O76100 309 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 RPS12P25398 132 aaKnown RBP14.98□□□□□ -0.01
CIRBP-228ENST00000590347 SLC1A2P43004 574 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 MAP3K7CLP57077 242 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 HOXC5Q00444 222 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 SP2Q02086 613 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 PPP1R26Q5T8A7 1209 aaPredicted RBP14.98□□□□□ -0.01
CIRBP-228ENST00000590347 BPIFB1Q8TDL5 484 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 CELF6Q96J87 481 aaKnown RBP14.98□□□□□ -0.01
CIRBP-228ENST00000590347 CEP19Q96LK0 163 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 TBCBQ99426 244 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 NAT9Q9BTE0 207 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 SIX4Q9UIU6 781 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 ZNF780AO75290 641 aaPredicted RBP14.98□□□□□ -0.01
CIRBP-228ENST00000590347 FCGRTP55899 365 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 RAB25P57735 213 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 GTF2H3Q13889 308 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 PUS10Q3MIT2 529 aaKnown RBP14.98□□□□□ -0.01
CIRBP-228ENST00000590347 SPANXN2Q5MJ10 180 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 AFAP1L2Q8N4X5 818 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 MINDY1Q8N5J2 469 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 RNF170Q96K19 258 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 MUTYHQ9UIF7 546 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 MAN2B2Q9Y2E5 1009 aa14.98□□□□□ -0.01
CIRBP-228ENST00000590347 FAM92AA1XBS5 289 aa14.97□□□□□ -0.01
CIRBP-228ENST00000590347 NCF1BA6NI72 391 aaPredicted RBP14.97□□□□□ -0.01
CIRBP-228ENST00000590347 NCF1CA8MVU1 366 aaPredicted RBP14.97□□□□□ -0.01
CIRBP-228ENST00000590347 MYO1GB0I1T2 1018 aa14.97□□□□□ -0.01
CIRBP-228ENST00000590347 NPHS1O60500 1241 aa14.97□□□□□ -0.01
CIRBP-228ENST00000590347 MED26O95402 600 aa14.97□□□□□ -0.01
CIRBP-228ENST00000590347 TNNC2P02585 160 aa14.97□□□□□ -0.01
CIRBP-228ENST00000590347 NCF1P14598 390 aaPredicted RBP14.97□□□□□ -0.01
CIRBP-228ENST00000590347 NAGAP17050 411 aa14.97□□□□□ -0.01
CIRBP-228ENST00000590347 EEF1DP3Q658K8 133 aa14.97□□□□□ -0.01
CIRBP-228ENST00000590347 DET1Q7L5Y6 550 aa14.97□□□□□ -0.01
CIRBP-228ENST00000590347 RAB43Q86YS6 212 aa14.97□□□□□ -0.01
CIRBP-228ENST00000590347 WDR49Q8IV35 697 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms