RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 POLR1CO15160 346 aaPredicted RBP12.4□□□□□ -0.42
RFX1-207ENST00000589937 DDX3YO15523 660 aaKnown RBP12.4□□□□□ -0.42
RFX1-207ENST00000589937 ANXA9O76027 345 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 LPOP22079 712 aaPredicted RBP12.4□□□□□ -0.42
RFX1-207ENST00000589937 STAT5AP42229 794 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 VAV2P52735 878 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 GDF10P55107 478 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 RWDD2BP57060 319 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 COPS2P61201 443 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 DMPKQ09013 629 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 ITGA9Q13797 1035 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 TAF1AQ15573 450 aaPredicted RBP12.4□□□□□ -0.42
RFX1-207ENST00000589937 COLEC12Q5KU26 742 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 CACHD1Q5VU97 1274 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 ITPRIPL1Q6GPH6 555 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 FBXO38Q6PIJ6 1188 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 RANBP10Q6VN20 620 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 PRSS42Q7Z5A4 293 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 AVL9Q8NBF6 648 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 GALNT6Q8NCL4 622 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 DNAJC1Q96KC8 554 aaKnown RBP12.4□□□□□ -0.42
RFX1-207ENST00000589937 SPATA13Q96N96 652 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 TTC25Q96NG3 672 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 SRPK1Q96SB4 655 aaKnown RBP12.4□□□□□ -0.42
RFX1-207ENST00000589937 TBL1YQ9BQ87 522 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 ZCCHC2Q9C0B9 1178 aaKnown RBP12.4□□□□□ -0.42
RFX1-207ENST00000589937 STARD5Q9NSY2 213 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 CAPN6Q9Y6Q1 641 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 CCDC88CQ9P219 2028 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 CCDC66A2RUB6 948 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 SRP72O76094 671 aaKnown RBP12.39□□□□□ -0.43
RFX1-207ENST00000589937 KIAA0754O94854 1291 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 METTL18O95568 372 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 MTHFD1P11586 935 aaKnown RBP12.39□□□□□ -0.43
RFX1-207ENST00000589937 VCLP18206 1134 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 MSH3P20585 1137 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 HALP42357 657 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 POLE2P56282 527 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 CDC20Q12834 499 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 PLCL1Q15111 1095 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 KIAA1328Q86T90 577 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 TMTC1Q8IUR5 882 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 FAM71DQ8N9W8 422 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 ZNF398Q8TD17 642 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 ATG4AQ8WYN0 398 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 STARD8Q92502 1023 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 SLC45A3Q96JT2 553 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 TEFMQ96QE5 360 aaKnown RBP12.39□□□□□ -0.43
RFX1-207ENST00000589937 RUFY1Q96T51 708 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 INSM2Q96T92 566 aaPredicted RBP12.39□□□□□ -0.43
RFX1-207ENST00000589937 ASB8Q9H765 288 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 LUC7LQ9NQ29 371 aaKnown RBP12.39□□□□□ -0.43
RFX1-207ENST00000589937 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.39□□□□□ -0.43
RFX1-207ENST00000589937 RELNP78509 3460 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 MED13Q9UHV7 2174 aa12.39□□□□□ -0.43
RFX1-207ENST00000589937 NBASA2RRP1 2371 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 PCSK5Q92824 1860 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 COL12A1Q99715 3063 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 ZNF891A8MT65 544 aaPredicted RBP12.38□□□□□ -0.43
RFX1-207ENST00000589937 BTNL10A8MVZ5 291 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 LDB2O43679 373 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 FURINP09958 794 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 EBLN1P0CF75 366 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 FOLR1P15328 257 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 TPH1P17752 444 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 SEPT6Q14141 434 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 KCTD19Q17RG1 926 aaPredicted RBP12.38□□□□□ -0.43
RFX1-207ENST00000589937 ZDHHC20Q5W0Z9 365 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 METRNLQ641Q3 311 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 C16orf46Q6P387 395 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 BORAQ6PGQ7 559 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 TMEM135Q86UB9 458 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 PTRH1Q86Y79 214 aaKnown RBP12.38□□□□□ -0.43
RFX1-207ENST00000589937 SPC24Q8NBT2 197 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 DTX3LQ8TDB6 740 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 BRSK1Q8TDC3 778 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 KLHL6Q8WZ60 621 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 C12orf66Q96MD2 445 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 MAP3K3Q99759 626 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 LNPEPQ9UIQ6 1025 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 CRLS1Q9UJA2 301 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 CROTQ9UKG9 612 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 EFR3BQ9Y2G0 817 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 RPS6KL1Q9Y6S9 549 aa12.38□□□□□ -0.43
RFX1-207ENST00000589937 HECTD1Q9ULT8 2610 aa12.37□□□□□ -0.43
RFX1-207ENST00000589937 FLNCQ14315 2725 aa12.37□□□□□ -0.43
RFX1-207ENST00000589937 OR51F1A6NGY5 319 aa12.37□□□□□ -0.43
RFX1-207ENST00000589937 C2orf81A6NN90 581 aa12.37□□□□□ -0.43
RFX1-207ENST00000589937 TERTO14746 1132 aaKnown RBP12.37□□□□□ -0.43
RFX1-207ENST00000589937 STK10O94804 968 aaKnown RBP12.37□□□□□ -0.43
RFX1-207ENST00000589937 IPO7O95373 1038 aaKnown RBP12.37□□□□□ -0.43
RFX1-207ENST00000589937 POLBP06746 335 aa12.37□□□□□ -0.43
RFX1-207ENST00000589937 NELFEP18615 380 aaKnown RBP12.37□□□□□ -0.43
RFX1-207ENST00000589937 NR1D1P20393 614 aa12.37□□□□□ -0.43
RFX1-207ENST00000589937 MAP4P27816 1152 aaKnown RBP12.37□□□□□ -0.43
RFX1-207ENST00000589937 DLSTP36957 453 aa12.37□□□□□ -0.43
RFX1-207ENST00000589937 ABHD18Q0P651 414 aa12.37□□□□□ -0.43
RFX1-207ENST00000589937 KCNAB2Q13303 367 aa12.37□□□□□ -0.43
RFX1-207ENST00000589937 KLF1Q13351 362 aaPredicted RBP12.37□□□□□ -0.43
RFX1-207ENST00000589937 TUBB3Q13509 450 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms