RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 KPNA5O15131 536 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 NUAK1O60285 661 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 TPBGLP0DKB5 382 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 ENO3P13929 434 aaPredicted RBP25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 OVGP1Q12889 678 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 GKAP1Q5VSY0 366 aaPredicted RBP25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 ANO7Q6IWH7 933 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 TRIM69Q86WT6 500 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 SLC22A9Q8IVM8 553 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 OR2T34Q8NGX1 318 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 ELMO1Q92556 727 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 EXT2Q93063 718 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 TMEM237Q96Q45 408 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 SORT1Q99523 831 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 SGK2Q9HBY8 427 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 TMEM114B3SHH9 223 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 GPC4O75487 556 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 ZNF8P17098 575 aaPredicted RBP25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 IGFALSP35858 605 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 ABCE1P61221 599 aaKnown RBP25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 HSPA14Q0VDF9 509 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 BOP1Q14137 746 aaKnown RBP25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 PPP1R3AQ16821 1122 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 ADAMTSL2Q86TH1 951 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 VRK3Q8IV63 474 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 ZNF547Q8IVP9 402 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 PHF21BQ96EK2 531 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 ZNF514Q96K75 400 aaPredicted RBP25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 CCM2Q9BSQ5 444 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 C1QTNF7Q9BXJ2 289 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 WDR26Q9H7D7 661 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 ACSS2Q9NR19 701 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 NCKIPSDQ9NZQ3 722 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 GULP1Q9UBP9 304 aa25.58■■□□□ 1.69
SCAMP4-210ENST00000588555 SYCE1LA8MT33 242 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 KLK8O60259 260 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 SMIM24O75264 130 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 HK3P52790 923 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 ASPHQ12797 758 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 SF3A3Q12874 501 aaKnown RBP eCLIP25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 SPATA21Q7Z572 469 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 PGBD3Q8N328 593 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 TSTD1Q8NFU3 115 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 SEC16BQ96JE7 1060 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 HHIPQ96QV1 700 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 DRC3Q9H069 523 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 GPR34Q9UPC5 381 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 TMEM98Q9Y2Y6 226 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 OR1A2Q9Y585 309 aa25.57■■□□□ 1.68
SCAMP4-210ENST00000588555 LRRC72A6NJI9 287 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 TGDSO95455 350 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 PJA1Q8NG27 643 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 ASZ1Q8WWH4 475 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 CLDN23Q96B33 292 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 LINC00615Q96LM1 132 aaPredicted RBP25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 FZD3Q9NPG1 666 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 MUTYHQ9UIF7 546 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 ADAMTS6Q9UKP5 1117 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 CHUKO15111 745 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 SLC31A1O15431 190 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 SLCO2B1O94956 709 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 GTF2H3Q13889 308 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 TGFBIQ15582 683 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 GPSM1Q86YR5 675 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 TRAPPC5Q8IUR0 188 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 DLG3Q92796 817 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 L3HYPDHQ96EM0 354 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 CHRDQ9H2X0 955 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 CD320Q9NPF0 282 aa25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 PCYT1BQ9Y5K3 369 aaPredicted RBP25.56■■□□□ 1.68
SCAMP4-210ENST00000588555 SLC5A10A0PJK1 596 aa25.55■■□□□ 1.68
SCAMP4-210ENST00000588555 SUPT3HB4E1H0 165 aa25.55■■□□□ 1.68
SCAMP4-210ENST00000588555 SUPT3HO75486 399 aa25.55■■□□□ 1.68
SCAMP4-210ENST00000588555 IMPDH1P20839 514 aa25.55■■□□□ 1.68
SCAMP4-210ENST00000588555 RCN2Q14257 317 aa25.55■■□□□ 1.68
SCAMP4-210ENST00000588555 PFKFB4Q16877 469 aa25.55■■□□□ 1.68
SCAMP4-210ENST00000588555 XKR5Q6UX68 686 aa25.55■■□□□ 1.68
SCAMP4-210ENST00000588555 C11orf96Q7Z7L8 435 aa25.55■■□□□ 1.68
SCAMP4-210ENST00000588555 PTGR2Q8N8N7 351 aaPredicted RBP25.55■■□□□ 1.68
SCAMP4-210ENST00000588555 FAM126AQ9BYI3 521 aaPredicted RBP25.55■■□□□ 1.68
SCAMP4-210ENST00000588555 LATO43561 262 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 NPHS1O60500 1241 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 SEMA4FO95754 770 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 MPC1LP0DKB6 136 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 CCR10P46092 362 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 ZNF678Q5SXM1 525 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 CRLF3Q8IUI8 442 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 LSMEM2Q8N112 164 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 LILRA3Q8N6C8 439 aaPredicted RBP25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 CCNYL1Q8N7R7 359 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 THOC1Q96FV9 657 aaKnown RBP25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 CYP8B1Q9UNU6 501 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 CHRNGP07510 517 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 MYCLP1P12525 358 aaPredicted RBP25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 GFAPP14136 432 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 HERVK_113P63132 956 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 DOK6Q6PKX4 331 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 NEK10Q6ZWH5 1172 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 FBXO39Q8N4B4 442 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 DENND6BQ8NEG7 585 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms