RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 LRRC38Q5VT99 294 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 ARMC6Q6NXE6 501 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 KLHL35Q6PF15 583 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 OOSP2Q86WS3 158 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 TMEM126BQ8IUX1 230 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 ZNF567Q8N184 647 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 DDHD1Q8NEL9 900 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 UBXN4Q92575 508 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 OXNAD1Q96HP4 312 aaPredicted RBP13.41□□□□□ -0.26
HDAC5-208ENST00000588419 FICDQ9BVA6 458 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 TRABDQ9H4I3 376 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 C10orf88Q9H8K7 445 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 HACD3Q9P035 362 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 IL17CQ9P0M4 197 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 TLK1Q9UKI8 766 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 UBR5O95071 2799 aaPredicted RBP13.41□□□□□ -0.26
HDAC5-208ENST00000588419 MED13Q9UHV7 2174 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 LOC285095A0A1B0GVY8 99 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 H7C0C1 242 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 STX7O15400 261 aaKnown RBP13.4□□□□□ -0.26
HDAC5-208ENST00000588419 PSTPIP1O43586 416 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 PRAMEF1O95521 474 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 SLC35G4P0C7Q5 338 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 MTHFD1P11586 935 aaKnown RBP13.4□□□□□ -0.26
HDAC5-208ENST00000588419 HLA-DPA1P20036 260 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 ATP5OP48047 213 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 NR2C2P49116 596 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 ACY1Q03154 408 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 SRSF1Q07955 248 aaKnown RBP eCLIP13.4□□□□□ -0.26
HDAC5-208ENST00000588419 ADCY2Q08462 1091 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 KRT33BQ14525 404 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 GSE1Q14687 1217 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 GPR19Q15760 415 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 CRTC2Q53ET0 693 aaPredicted RBP13.4□□□□□ -0.26
HDAC5-208ENST00000588419 CCDC181Q5TID7 509 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 ZDHHC20Q5W0Z9 365 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 CPZQ66K79 652 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 FBXO38Q6PIJ6 1188 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 ATCAYQ86WG3 371 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 MR1Q95460 341 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 ZNF514Q96K75 400 aaPredicted RBP13.4□□□□□ -0.26
HDAC5-208ENST00000588419 QKIQ96PU8 341 aaKnown RBP eCLIP13.4□□□□□ -0.26
HDAC5-208ENST00000588419 APOL2Q9BQE5 337 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 FGF21Q9NSA1 209 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 HRASLS2Q9NWW9 162 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 EPHA6Q9UF33 1036 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 ARL5AQ9Y689 179 aa13.4□□□□□ -0.26
HDAC5-208ENST00000588419 MAST4O15021 2626 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 OR6C74A6NCV1 312 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 OR5K3A6NET4 321 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 TLCD2A6NGC4 264 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 ARGFXA6NJG6 315 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 SCRG1O75711 98 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 POLBP06746 335 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 ATXN8OSP0DMR3 200 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 MARCKSL1P49006 195 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 PMS2P54278 862 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 TMPRSS15P98073 1019 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 PDE1BQ01064 536 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 DMPKQ09013 629 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 MPP3Q13368 585 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 OLIG2Q13516 323 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 TFDP3Q5H9I0 405 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 TCTN3Q6NUS6 607 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 VSTM4Q8IW00 320 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 RNF214Q8ND24 703 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 SLC41A2Q96JW4 573 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 FCRL5Q96RD9 977 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 INSM2Q96T92 566 aaPredicted RBP13.39□□□□□ -0.27
HDAC5-208ENST00000588419 TRIM55Q9BYV6 548 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 RAB33BQ9H082 229 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 AKIRIN1Q9H9L7 192 aaPredicted RBP13.39□□□□□ -0.27
HDAC5-208ENST00000588419 FKBPLQ9UIM3 349 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 CRLS1Q9UJA2 301 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 TFR2Q9UP52 801 aa13.39□□□□□ -0.27
HDAC5-208ENST00000588419 hCG_1818297A0A087WSY0 165 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 GOLGA6L3A6NEY3 463 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 C21orf140B9A014 251 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 GAPDHSO14556 408 aaPredicted RBP13.38□□□□□ -0.27
HDAC5-208ENST00000588419 KCNJ13O60928 360 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 CPNE3O75131 537 aaKnown RBP13.38□□□□□ -0.27
HDAC5-208ENST00000588419 AGTP01019 485 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 PDGFAP04085 211 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 RPS15P62841 145 aaKnown RBP13.38□□□□□ -0.27
HDAC5-208ENST00000588419 HSD11B2P80365 405 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 IL10RAQ13651 578 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 DAAM2Q86T65 1068 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
HDAC5-208ENST00000588419 OR4K2Q8NGD2 314 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 ZNF398Q8TD17 642 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 MIB2Q96AX9 1013 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 DCUN1D1Q96GG9 259 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 PPM1MQ96MI6 270 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 HEMGNQ9BXL5 484 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 TLR10Q9BXR5 811 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 ASB8Q9H765 288 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 ACSS2Q9NR19 701 aa13.38□□□□□ -0.27
HDAC5-208ENST00000588419 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.38□□□□□ -0.27
HDAC5-208ENST00000588419 NAV2Q8IVL1 2488 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms