RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 RBBP7Q16576 425 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 SMU1Q2TAY7 513 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 PLA2G4EQ3MJ16 856 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 SETMARQ53H47 684 aaPredicted RBP8.58□□□□□ -1.04
BDNF-219ENST00000584049 BTLAQ7Z6A9 289 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 FAM126BQ8IXS8 530 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 GPC2Q8N158 579 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 ATP6V0D2Q8N8Y2 350 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 ZNF548Q8NEK5 533 aaPredicted RBP8.58□□□□□ -1.04
BDNF-219ENST00000584049 TRIB2Q92519 343 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 RORBQ92753 470 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 YIPF6Q96EC8 236 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 SLC47A1Q96FL8 570 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 REXO5Q96IC2 774 aaKnown RBP8.58□□□□□ -1.04
BDNF-219ENST00000584049 PPM1MQ96MI6 270 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 SH3GL1Q99961 368 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 ZYG11BQ9C0D3 744 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 ACTR8Q9H981 624 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 ERVW-1Q9UQF0 538 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 MED16Q9Y2X0 877 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 NEUROG3Q9Y4Z2 214 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 ORC6Q9Y5N6 252 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 MAGED1Q9Y5V3 778 aaPredicted RBP8.58□□□□□ -1.04
BDNF-219ENST00000584049 ST14Q9Y5Y6 855 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 GSTA4O15217 222 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 INMTO95050 263 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 RETP07949 1114 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 JUNDP17535 347 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 PSMA3P25788 255 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 PRDX3P30048 256 aaKnown RBP8.58□□□□□ -1.04
BDNF-219ENST00000584049 PBX3P40426 434 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 CLCNKBP51801 687 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 MTPNP58546 118 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 PERM1Q5SV97 790 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 PIK3R6Q5UE93 754 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 AFTPHQ6ULP2 937 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 Q6ZSR9 355 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 PIWIL3Q7Z3Z3 882 aaKnown RBP8.58□□□□□ -1.04
BDNF-219ENST00000584049 HIPK1Q86Z02 1210 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 ZCCHC7Q8N3Z6 543 aaKnown RBP8.58□□□□□ -1.04
BDNF-219ENST00000584049 ZNF513Q8N8E2 541 aaPredicted RBP8.58□□□□□ -1.04
BDNF-219ENST00000584049 C3orf58Q8NDZ4 430 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 ZFP90Q8TF47 636 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 TBC1D20Q96BZ9 403 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 KLHL5Q96PQ7 755 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 SMURF2Q9HAU4 748 aa8.58□□□□□ -1.04
BDNF-219ENST00000584049 IGLV3-10A0A075B6K4 115 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 ISPDA4D126 451 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 NRIP1P48552 1158 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 HIST2H2ACQ16777 129 aaPredicted RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 SYT6Q5T7P8 510 aaPredicted RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 CYP20A1Q6UW02 462 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 CCDC80Q76M96 950 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 LGI2Q8N0V4 545 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 SLC39A13Q96H72 371 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 POLR1EQ9GZS1 481 aaKnown RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 ACTL8Q9H568 366 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 SP140LQ9H930 580 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 CPNE5Q9HCH3 593 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 THG1LQ9NWX6 298 aaKnown RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 IKZF3Q9UKT9 509 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 INTS6Q9UL03 887 aaKnown RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 TLR6Q9Y2C9 796 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 CDC7O00311 574 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 PRKD3O94806 890 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 HAPLN1P10915 354 aaPredicted RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 PABPC1P11940 636 aaKnown RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 PCNAP12004 261 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 S100A1P23297 94 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 SOX11P35716 441 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 MFSD10Q14728 455 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 INAQ16352 499 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 TIGD5Q53EQ6 642 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 SCD5Q86SK9 330 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 DYNC2LI1Q8TCX1 351 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 ZNF300Q96RE9 604 aaPredicted RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 C17orf80Q9BSJ5 609 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 DUSP21Q9H596 190 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 PIF1Q9H611 641 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 CARS2Q9HA77 564 aaKnown RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 NLE1Q9NVX2 485 aaPredicted RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 PAK1IP1Q9NWT1 392 aaPredicted RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 TPRKBQ9Y3C4 175 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 TSC22D4Q9Y3Q8 395 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 ARL5AQ9Y689 179 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 NLRC5Q86WI3 1866 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 NPEPPSL1A6NEC2 478 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 E2F3O00716 465 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 GNGT2O14610 69 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 XYLBO75191 536 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 NADKO95544 446 aaPredicted RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 MOCS2O96007 188 aaPredicted RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 BMP4P12644 408 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 AGXTP21549 392 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 CD40LGP29965 261 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 DCTP40126 519 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 IFITM3Q01628 133 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 EMX1Q04741 257 aaPredicted RBP8.57□□□□□ -1.04
BDNF-219ENST00000584049 CDK5R2Q13319 367 aa8.57□□□□□ -1.04
BDNF-219ENST00000584049 KIAA0040Q15053 153 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms