RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 CDK14O94921 469 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 CBX6O95503 412 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 KLK3P07288 261 aaPredicted RBP8.54□□□□□ -1.04
NUP85-223ENST00000583877 MMP2P08253 660 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 RAB40ALP0C0E4 278 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 ELAVL4P26378 380 aaKnown RBP8.54□□□□□ -1.04
NUP85-223ENST00000583877 CD86P42081 329 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 HALP42357 657 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 SSR1P43307 286 aaKnown RBP8.54□□□□□ -1.04
NUP85-223ENST00000583877 ARL4DP49703 201 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 GSDMDP57764 484 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 HSD11B2P80365 405 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 SLC25A11Q02978 314 aaKnown RBP8.54□□□□□ -1.04
NUP85-223ENST00000583877 MMRN1Q13201 1228 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 GPS2Q13227 327 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 ZRANB3Q5FWF4 1079 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 CCDC183Q5T5S1 534 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 C1QL3Q5VWW1 255 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 ALS2CLQ60I27 953 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 NCBP2-AS2Q69YL0 99 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 APTXQ7Z2E3 356 aaKnown RBP8.54□□□□□ -1.04
NUP85-223ENST00000583877 ZNF571Q7Z3V5 609 aaPredicted RBP8.54□□□□□ -1.04
NUP85-223ENST00000583877 C11orf96Q7Z7L8 435 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 TMEM126BQ8IUX1 230 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 IQCKQ8N0W5 287 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 SLC34A3Q8N130 599 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 TMEM102Q8N9M5 508 aaPredicted RBP8.54□□□□□ -1.04
NUP85-223ENST00000583877 GLIS1Q8NBF1 620 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 ZNF501Q96CX3 271 aaPredicted RBP8.54□□□□□ -1.04
NUP85-223ENST00000583877 SNRNP40Q96DI7 357 aaKnown RBP8.54□□□□□ -1.04
NUP85-223ENST00000583877 C19orf60Q96EN9 201 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 SMAD5Q99717 465 aaKnown RBP8.54□□□□□ -1.04
NUP85-223ENST00000583877 MAP3K3Q99759 626 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 NLNQ9BYT8 704 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 CHST8Q9H2A9 424 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 HAUS4Q9H6D7 363 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 LATS2Q9NRM7 1088 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 KCND1Q9NSA2 647 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 GPR83Q9NYM4 423 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 C5AR2Q9P296 337 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 TRIM10Q9UDY6 481 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 SNX7Q9UNH6 387 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 WDR37Q9Y2I8 494 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 CCDC168Q8NDH2 2452 aa8.54□□□□□ -1.04
NUP85-223ENST00000583877 CACNA1CQ13936 2221 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 UBA6A0AVT1 1052 aaPredicted RBP8.53□□□□□ -1.04
NUP85-223ENST00000583877 LRRC53A6NM62 1247 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 DDX3XO00571 662 aaKnown RBP eCLIP8.53□□□□□ -1.04
NUP85-223ENST00000583877 ZNF185O15231 689 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 CD48P09326 243 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 PRKCIP41743 596 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 VAV2P52735 878 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 RRADP55042 308 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 ITGA1P56199 1179 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 MYL5Q02045 173 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 DMPKQ09013 629 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 DPYSL3Q14195 570 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 GALNT3Q14435 633 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 ASIC2Q16515 512 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 KHDC1Q4VXA5 237 aaKnown RBP8.53□□□□□ -1.04
NUP85-223ENST00000583877 DNTTIP2Q5QJE6 756 aaKnown RBP8.53□□□□□ -1.04
NUP85-223ENST00000583877 TMTC4Q5T4D3 741 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 CERS6Q6ZMG9 384 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 TMC3Q7Z5M5 1100 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 TRAPPC5Q8IUR0 188 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 ANKMY2Q8IV38 441 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 DSELQ8IZU8 1212 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 CARFQ8N187 725 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 TTC30BQ8N4P2 665 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 ENDOVQ8N8Q3 282 aaKnown RBP8.53□□□□□ -1.04
NUP85-223ENST00000583877 SLC38A9Q8NBW4 561 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 GPR150Q8NGU9 434 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 CPT1BQ92523 772 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 HDAC11Q96DB2 347 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 VPS35Q96QK1 796 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 XPO4Q9C0E2 1151 aaKnown RBP8.53□□□□□ -1.04
NUP85-223ENST00000583877 ISCUQ9H1K1 167 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 MAGEE1Q9HCI5 957 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 AIPL1Q9NZN9 384 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 TMEM63CQ9P1W3 806 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 IP6K2Q9UHH9 426 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 TCFL5Q9UL49 500 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 SHOC2Q9UQ13 582 aa8.53□□□□□ -1.04
NUP85-223ENST00000583877 OR5K3A6NET4 321 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 ANKUB1A6NFN9 424 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 A6NL46 340 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 MEN1O00255 615 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 KRT86O43790 486 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 MTX2O75431 263 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 ZBTB11O95625 1053 aaPredicted RBP8.52□□□□□ -1.05
NUP85-223ENST00000583877 SLC4A1P02730 911 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 BPIP17213 487 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 MX2P20592 715 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 ARSEP51690 589 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 TMEM115Q12893 351 aaPredicted RBP8.52□□□□□ -1.05
NUP85-223ENST00000583877 GTF2H3Q13889 308 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 PLCL1Q15111 1095 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 GPR19Q15760 415 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 RPE65Q16518 533 aa8.52□□□□□ -1.05
NUP85-223ENST00000583877 PLEKHN1Q494U1 663 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms