RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 ABCA7Q8IZY2 2146 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 SPTY2D1-AS1A0A0U1RR47 76 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 H3BQF6 201 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 BCAT2O15382 392 aaPredicted RBP10.56□□□□□ -0.72
SS18-213ENST00000579640 TYROBPO43914 113 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 POP7O75817 140 aaKnown RBP10.56□□□□□ -0.72
SS18-213ENST00000579640 KLHL2O95198 593 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 LTA4HP09960 611 aaKnown RBP10.56□□□□□ -0.72
SS18-213ENST00000579640 CCDC166P0CW27 439 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 GNSP15586 552 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 DHPSP49366 369 aaPredicted RBP10.56□□□□□ -0.72
SS18-213ENST00000579640 ATP6V0D1P61421 351 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 ARHGAP8P85298 464 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 GBX1Q14549 363 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 SYTL3Q4VX76 610 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 PYCR3Q53H96 274 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 AGAP9Q5VTM2 703 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 KLC3Q6P597 504 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 CRTC3Q6UUV7 619 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 ARMCX6Q7L4S7 300 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 MTERF4Q7Z6M4 381 aaKnown RBP10.56□□□□□ -0.72
SS18-213ENST00000579640 C11orf96Q7Z7L8 435 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 AMZ2Q86W34 360 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 SLC22A18ASQ8N1D0 253 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 ARFGAP2Q8N6H7 521 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 BEND7Q8N7W2 519 aaPredicted RBP10.56□□□□□ -0.72
SS18-213ENST00000579640 GIMAP7Q8NHV1 300 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 NAT14Q8WUY8 206 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 FAM136AQ96C01 138 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 OR2M4Q96R27 311 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 SLC13A1Q9BZW2 595 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 DERL2Q9GZP9 239 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 NMRAL1Q9HBL8 299 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 FGF22Q9HCT0 170 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 FAM53CQ9NYF3 392 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 GALPQ9UBC7 116 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 ZNHIT2Q9UHR6 403 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 GRID1Q9ULK0 1009 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 SUFUQ9UMX1 484 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 DGKBQ9Y6T7 804 aa10.56□□□□□ -0.72
SS18-213ENST00000579640 BPTFQ12830 3046 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 A0A1B0GTW7 788 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 SLC5A10A0PJK1 596 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 TLR4O00206 839 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 DLL1O00548 723 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 VILLO15195 856 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 TM9SF1O15321 606 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 GPC4O75487 556 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 RASGRP1O95267 797 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 CREB1P16220 341 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 MAOBP27338 520 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 HOXD11P31277 338 aaPredicted RBP10.55□□□□□ -0.72
SS18-213ENST00000579640 MAPK9P45984 424 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 BLKP51451 505 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 AFF3P51826 1226 aaKnown RBP10.55□□□□□ -0.72
SS18-213ENST00000579640 SRP54P61011 504 aaKnown RBP10.55□□□□□ -0.72
SS18-213ENST00000579640 PPP2R2AP63151 447 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 IRF9Q00978 393 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 DMPKQ09013 629 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 RPA4Q13156 261 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 SRSF5Q13243 272 aaKnown RBP10.55□□□□□ -0.72
SS18-213ENST00000579640 LRP8Q14114 963 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 BOP1Q14137 746 aaKnown RBP10.55□□□□□ -0.72
SS18-213ENST00000579640 CSHL1Q14406 222 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 TEAD4Q15561 434 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 ZNF658BQ4V348 819 aaPredicted RBP10.55□□□□□ -0.72
SS18-213ENST00000579640 TPRG1LQ5T0D9 272 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 TMEM207Q6UWW9 146 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 NEK10Q6ZWH5 1172 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 PARGQ86W56 976 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 CPNE9Q8IYJ1 553 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 CENPLQ8N0S6 344 aaPredicted RBP10.55□□□□□ -0.72
SS18-213ENST00000579640 OR1E3Q8WZA6 343 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 GLMNQ92990 594 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 TMEM159Q96B96 161 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 SLC30A3Q99726 388 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 CARS2Q9HA77 564 aaKnown RBP10.55□□□□□ -0.72
SS18-213ENST00000579640 CYP4F12Q9HCS2 524 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 KCNK9Q9NPC2 374 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 TRNAU1APQ9NX07 287 aaKnown RBP10.55□□□□□ -0.72
SS18-213ENST00000579640 MOSPD1Q9UJG1 213 aa10.55□□□□□ -0.72
SS18-213ENST00000579640 SPAG7O75391 227 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 SLCO2B1O94956 709 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 ZWINTO95229 277 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 TNFP01375 233 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 WNT1P04628 370 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 MPC1LP0DKB6 136 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 NR1D1P20393 614 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 ITPKAP23677 461 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 HPDP32754 393 aaPredicted RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 HOXD12P35452 270 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 GNPDA1P46926 289 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 PGGT1BP53609 377 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 C21orf59P57076 290 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 PPARDQ03181 441 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 HSPA14Q0VDF9 509 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 SIM2Q14190 667 aaPredicted RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 FZD2Q14332 565 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 ACAP2Q15057 778 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 ALG11Q2TAA5 492 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms