RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ZNF12P17014 697 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 CD97P48960 835 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 TAF10Q12962 218 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 ANKRD34AQ69YU3 496 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 GTF2IRD2BQ6EKJ0 949 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 ENPP6Q6UWR7 440 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 GTF2IRD2Q86UP8 949 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 LGI2Q8N0V4 545 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 TRPV1Q8NER1 839 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 FUBP3Q96I24 572 aaKnown RBP eCLIP18.8■□□□□ 0.6
SCARF1-206ENST00000573852 TSR3Q9UJK0 312 aaKnown RBP18.8■□□□□ 0.6
SCARF1-206ENST00000573852 PCDHGA8Q9Y5G5 932 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 A0A0U1RQS6 177 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 BCL10O95999 233 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 CCR3P51677 355 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 GNA12Q03113 381 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 PWP1Q13610 501 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 RFTN2Q52LD8 501 aaPredicted RBP18.8■□□□□ 0.6
SCARF1-206ENST00000573852 HS3ST5Q8IZT8 346 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 SPARTQ8N0X7 666 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 CENPSQ8N2Z9 138 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 PDZD8Q8NEN9 1154 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 BPIFA1Q9NP55 256 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 COMMD8Q9NX08 183 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 UTS2RQ9UKP6 389 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 DOLKQ9UPQ8 538 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 COQ6Q9Y2Z9 468 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 POLR3HQ9Y535 204 aaPredicted RBP18.8■□□□□ 0.6
SCARF1-206ENST00000573852 C2orf81A6NN90 581 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 IQCF5A8MTL0 148 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 LSM1O15116 133 aaKnown RBP18.79■□□□□ 0.6
SCARF1-206ENST00000573852 DFNA5O60443 496 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 ATP6V1G1O75348 118 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 MC4RP32245 332 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 KCNQ1P51787 676 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 TUBA3CQ13748 450 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 NR6A1Q15406 480 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 NFE2Q16621 373 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-206ENST00000573852 SULT1C3Q6IMI6 304 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 PRR23BQ6ZRT6 265 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 ZNF598Q86UK7 904 aaKnown RBP18.79■□□□□ 0.6
SCARF1-206ENST00000573852 ZDHHC13Q8IUH4 622 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 C8orf59Q8N0T1 100 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-206ENST00000573852 FBXO30Q8TB52 745 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 FIG4Q92562 907 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 FAM118AQ9NWS6 357 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 SMPD4Q9NXE4 827 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 VAPAQ9P0L0 249 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 PSME2Q9UL46 239 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 PCDHB5Q9Y5E4 795 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 CHD5Q8TDI0 1954 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 FAM92AA1XBS5 289 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 G3V2T6 193 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 K7EPI3 171 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 NOBOXO60393 691 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 DUSP11O75319 330 aaKnown RBP18.79■□□□□ 0.6
SCARF1-206ENST00000573852 FUCA1P04066 466 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 HTR1AP08908 422 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 CNPP09543 421 aaKnown RBP18.79■□□□□ 0.6
SCARF1-206ENST00000573852 OCM2P0CE71 109 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 OCMP0CE72 109 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-206ENST00000573852 AKR1A1P14550 325 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 PLA2G16P53816 162 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 PIGFQ07326 219 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 BFSP2Q13515 415 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 IMPG1Q17R60 797 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 RBM48Q5RL73 367 aaKnown RBP18.79■□□□□ 0.6
SCARF1-206ENST00000573852 GALNT18Q6P9A2 607 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 RAB2BQ8WUD1 216 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 PSKH2Q96QS6 385 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 MBOAT4Q96T53 435 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 C17orf80Q9BSJ5 609 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 SPON2Q9BUD6 331 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 AMBRA1Q9C0C7 1298 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 CCSER2Q9H7U1 834 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 GPN2Q9H9Y4 310 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-206ENST00000573852 HPS4Q9NQG7 708 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 SEPT3Q9UH03 358 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 SLC30A1Q9Y6M5 507 aa18.79■□□□□ 0.6
SCARF1-206ENST00000573852 OR7A17O14581 309 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 KATNA1O75449 491 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 PIGAP37287 484 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 LAPTM5Q13571 262 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 ATP1A4Q13733 1029 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 ABRAXAS2Q15018 415 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 MEP1AQ16819 746 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 AP5B1Q2VPB7 878 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 SLC44A4Q53GD3 710 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 LPCAT1Q8NF37 534 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 OR4F6Q8NGB9 312 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 CINPQ9BW66 212 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-206ENST00000573852 SLC27A5Q9Y2P5 690 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 FUOMA2VDF0 154 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 INSIG1O15503 277 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 GPR39O43194 453 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 LPOP22079 712 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-206ENST00000573852 PSMA3P25788 255 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 GSTM2P28161 218 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 TPP2P29144 1249 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-206ENST00000573852 SLC6A4P31645 630 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms