RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 INSM2Q96T92 566 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 ZPBPQ9BS86 351 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 ULBP3Q9BZM4 244 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 FAM117AQ9C073 453 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 CLMPQ9H6B4 373 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 AKIRIN1Q9H9L7 192 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 GRPEL1Q9HAV7 217 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 EPHA6Q9UF33 1036 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 CROTQ9UKG9 612 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 TRHDEQ9UKU6 1024 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 PCDHA3Q9Y5H8 950 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 RPS6KL1Q9Y6S9 549 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 NAV2Q8IVL1 2488 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 PCSK5Q92824 1860 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 SEC16AO15027 2179 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 UTP20O75691 2785 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 GRID2IPA4D2P6 1211 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 GOLGA6L3A6NEY3 463 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 K7EM74 188 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 TOX3O15405 576 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 PPFIA2O75334 1257 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 RASSF9O75901 435 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 KIAA0754O94854 1291 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 FGF5P12034 268 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 FOLR1P15328 257 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 NELFEP18615 380 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 ZNF140P52738 457 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 GTF2H3Q13889 308 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 MAP7Q14244 749 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 SPARCL1Q14515 664 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 ZNF658BQ4V348 819 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 COLEC12Q5KU26 742 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 ANKRD20A2Q5SQ80 823 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 ANKRD20A1Q5TYW2 823 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 CACHD1Q5VU97 1274 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 ANKRD20A3Q5VUR7 823 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 METRNLQ641Q3 311 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 IRGCQ6NXR0 463 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 KLHDC8BQ8IXV7 354 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 TXLNBQ8N3L3 684 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 SPC24Q8NBT2 197 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 ACRBPQ8NEB7 543 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 OR13C4Q8NGS5 318 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 BRSK1Q8TDC3 778 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 SLC41A2Q96JW4 573 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 OSBPL8Q9BZF1 889 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 RAB33BQ9H082 229 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 WWP1Q9H0M0 922 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 ADNPQ9H2P0 1102 aa13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 USP9XQ93008 2570 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 PRRC2CQ9Y520 2896 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-211ENST00000569653 AGAP14A8MT82 685 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 STX7O15400 261 aaKnown RBP13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 SPAG6O75602 509 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 PRSS56P0CW18 603 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 PYGMP11217 842 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 MTHFD1P11586 935 aaKnown RBP13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 CTNNA2P26232 953 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 PTPN7P35236 360 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 CDKN1CP49918 316 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 GEMP55040 296 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 EIF3EP60228 445 aaKnown RBP13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 SKIDA1Q1XH10 827 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 DEFB109BQ30KR1 87 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 ZDHHC20Q5W0Z9 365 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 FBXO38Q6PIJ6 1188 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 MAP3K3Q99759 626 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 FSD1LQ9BXM9 530 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 EPN3Q9H201 632 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 FAM96AQ9H5X1 160 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 FAM8A1Q9UBU6 413 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 PKP3Q9Y446 797 aa13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 HEMK1Q9Y5R4 338 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-211ENST00000569653 MACROD2A1Z1Q3 448 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 MGAT4DA6NG13 374 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 BTNL10A8MVZ5 291 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 KCNN4O15554 427 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 LDB2O43679 373 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 SRP72O76094 671 aaKnown RBP13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 EBLN1P0CF75 366 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 RBP3P10745 1247 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 NR1D1P20393 614 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 LPOP22079 712 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 AKT1P31749 480 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 DLSTP36957 453 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 CCR10P46092 362 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 ARCN1P48444 511 aaKnown RBP13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 VAV2P52735 878 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 GSDMDP57764 484 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 COPS2P61201 443 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 TMPRSS15P98073 1019 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 KCNC4Q03721 635 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 TLE1Q04724 770 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 LAMB3Q13751 1172 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 ITGA9Q13797 1035 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 IL11RAQ14626 422 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 TAF1AQ15573 450 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 BCL7AQ4VC05 210 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms