RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NBNO60934 754 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 SLC15A1P46059 708 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 SMARCB1Q12824 385 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 RAPSNQ13702 412 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 OXA1LQ15070 435 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 TBRG1Q3YBR2 411 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 CEP78Q5JTW2 689 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 TYW3Q6IPR3 259 aaKnown RBP10.77□□□□□ -0.69
PALB2-206ENST00000568219 ZNF544Q6NX49 715 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 LINGO1Q96FE5 620 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 SENP8Q96LD8 212 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 CNPPD1Q9BV87 410 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 MROQ9BYG7 248 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 ARL5AQ9Y689 179 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 NUP214P35658 2090 aaPredicted RBP10.77□□□□□ -0.69
PALB2-206ENST00000568219 TULP3O75386 442 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 PAGE1O75459 146 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 ARIH2O95376 493 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 HLA-DQB2P05538 268 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 GPX3P22352 226 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 PPP5CP53041 499 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 SNRPD2P62316 118 aaKnown RBP10.77□□□□□ -0.69
PALB2-206ENST00000568219 PTGR1Q14914 329 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 PYDC2Q56P42 97 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 TSTD2Q5T7W7 516 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 ZNF57Q68EA5 555 aaPredicted RBP10.77□□□□□ -0.69
PALB2-206ENST00000568219 LCN8Q6JVE9 175 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 VASH1Q7L8A9 365 aaPredicted RBP10.77□□□□□ -0.69
PALB2-206ENST00000568219 CYP2U1Q7Z449 544 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 SPATA2LQ8IUW3 424 aaPredicted RBP10.77□□□□□ -0.69
PALB2-206ENST00000568219 DTWD1Q8N5C7 304 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 MINDY1Q8N5J2 469 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 LPCAT1Q8NF37 534 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 GJD4Q96KN9 370 aaPredicted RBP10.77□□□□□ -0.69
PALB2-206ENST00000568219 Q96MT0 163 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 KIFC1Q9BW19 673 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 GPR63Q9BZJ6 419 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 ZBTB20Q9HC78 741 aaPredicted RBP10.77□□□□□ -0.69
PALB2-206ENST00000568219 DYRK4Q9NR20 520 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 UCKL1Q9NWZ5 548 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 NOD1Q9Y239 953 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 IFT52Q9Y366 437 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 PCDHGA11Q9Y5H2 935 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 ANKRD34BA5PLL1 514 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 H0YAE9 185 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 GPR182O15218 404 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 ULK1O75385 1050 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 GOT2P00505 430 aaKnown RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 EGFRP00533 1210 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 DNAJB2P25686 324 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 PRDX3P30048 256 aaKnown RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 KRT6CP48668 564 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 RACK1P63244 317 aaKnown RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 TYSND1Q2T9J0 566 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 ZNF362Q5T0B9 420 aaPredicted RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 ZNF549Q6P9A3 640 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 FAM131AQ6UXB0 335 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 RASAL3Q86YV0 1011 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 HOMEZQ8IX15 550 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 COLGALT2Q8IYK4 626 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 DNAJB3Q8WWF6 145 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 SLC35B4Q969S0 331 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 ELOVL6Q9H5J4 265 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 AGO3Q9H9G7 860 aaKnown RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 SNTG1Q9NSN8 517 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 PCDH10Q9P2E7 1040 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 ZNF451Q9Y4E5 1061 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 CNTRLQ7Z7A1 2325 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 PRMT5O14744 637 aaPredicted RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 TSPAN19P0C672 248 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 PIM1P11309 404 aaPredicted RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 PNPLA4P41247 253 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 KCNC1P48547 511 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 PRIM2P49643 509 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 CDKN2DP55273 166 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 EEFSECP57772 596 aaKnown RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 CLCA4Q14CN2 919 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 INO80DQ53TQ3 878 aaPredicted RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 CADM2Q8N3J6 435 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 MINDY2Q8NBR6 621 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 OR8H1Q8NGG4 311 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 OR4L1Q8NH43 312 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 KCNC2Q96PR1 638 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 TRNT1Q96Q11 434 aaKnown RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 PHOX2BQ99453 314 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 TNKS2Q9H2K2 1166 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 MARCH4Q9P2E8 410 aaPredicted RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 CD300AQ9UGN4 299 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 PHRF1Q9P1Y6 1649 aaKnown RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 C2orf81A6NN90 581 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 TSPAN4O14817 238 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 PLOD3O60568 738 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 PSIP1O75475 530 aaKnown RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 MLYCDO95822 493 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 OR1E1P30953 314 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 GMPSP49915 693 aaPredicted RBP10.76□□□□□ -0.69
PALB2-206ENST00000568219 MLLT10P55197 1068 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 CREB5Q02930 508 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 AQP6Q13520 282 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 TRIQKQ629K1 86 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms