RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 WASHC5Q12768 1159 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 SCAPQ12770 1279 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 PCBP2Q15366 365 aaKnown RBP eCLIP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 CDO1Q16878 200 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 ARL13BQ3SXY8 428 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 SLC25A52Q3SY17 297 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TAF1BQ53T94 588 aaPredicted RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 SPANXN3Q5MJ09 141 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 STEAP4Q687X5 459 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 ITPRIPL1Q6GPH6 555 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 LAIR1Q6GTX8 287 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 PMF1Q6P1K2 205 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TAF2Q6P1X5 1199 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 SCYL2Q6P3W7 929 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 ALKAL1Q6UXT8 129 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TMEM184AQ6ZMB5 413 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 PRUNE1Q86TP1 453 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TTC30AQ86WT1 665 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 LMNTD2Q8IXW0 634 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 KIRREL3Q8IZU9 778 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TMEM86AQ8N2M4 240 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 DBF4BQ8NFT6 615 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 OR6B3Q8NGW1 331 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 UBA3Q8TBC4 463 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 PPP4R1Q8TF05 950 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 AGAP11Q8TF27 550 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TRAPPC12Q8WVT3 735 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 MCUR1Q96AQ8 359 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 SKA1Q96BD8 255 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 STAMBPL1Q96FJ0 436 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 CSPG4P5Q96PW8 444 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 FAM111AQ96PZ2 611 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 HNRNPABQ99729 332 aaKnown RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 ADAM2Q99965 735 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 MYOCQ99972 504 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 WDR83Q9BRX9 315 aaKnown RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TTPALQ9BTX7 342 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TBC1D10AQ9BXI6 508 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 ASPSCR1Q9BZE9 553 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 C1orf21Q9H246 121 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 DHX35Q9H5Z1 703 aaKnown RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 KIF9Q9HAQ2 790 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 SLCO1B3Q9NPD5 702 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TDP1Q9NUW8 608 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 THAP1Q9NVV9 213 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 FBXO34Q9NWN3 711 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 DNAJB4Q9UDY4 337 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 GRID1Q9ULK0 1009 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 RUVBL1Q9Y265 456 aaKnown RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 STK38LQ9Y2H1 464 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TTLL3Q9Y4R7 772 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 IPPQ9Y573 584 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 HEY1Q9Y5J3 304 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 SPTBN2O15020 2390 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 MYH9P35579 1960 aaKnown RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 MYO7AQ13402 2215 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TRIP12Q14669 1992 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 A0A0G2JND7 137 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 GOLGA8QA0A0J9YX86 632 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 TCRBV7S3A2A0A539 114 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 GOLGA8OA6NCC3 632 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 GOLGA8NF8WBI6 632 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 GYG2O15488 501 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 LINC01565O15544 149 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 SUV39H1O43463 412 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 HTRA2O43464 458 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 TIMM44O43615 452 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 KLHL2O95198 593 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 GLP2RO95838 553 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 PDGFBP01127 241 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 C1QAP02745 245 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 VTNP04004 478 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 APOA4P06727 396 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 POLBP06746 335 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 BPGMP07738 259 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 SERPINA6P08185 405 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 HOXA11P31270 313 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 GP5P40197 560 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 LHX1P48742 406 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 POLD2P49005 469 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 RAP1GDS1P52306 607 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CRYBB1P53674 252 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CLNS1AP54105 237 aaKnown RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 BLOC1S1P78537 153 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 MRPS35P82673 323 aaKnown RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 COG7P83436 770 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CREMQ03060 361 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 PPARDQ03181 441 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 TARDBPQ13148 414 aaKnown RBP eCLIP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 PAFAH1B3Q15102 231 aaKnown RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 E2F5Q15329 346 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 TAF5Q15542 800 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 TRIM71Q2Q1W2 868 aaKnown RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 C15orf59Q2T9L4 293 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CCDC153Q494R4 210 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 PPP6R3Q5H9R7 873 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 ANKRD20A2Q5SQ80 823 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 ZNF618Q5T7W0 954 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms