RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 BUD31P41223 144 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 RORCP51449 518 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 DPYSL2Q16555 572 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 PEX5LQ8IYB4 626 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 DDX1Q92499 740 aaKnown RBP12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 PHOX2BQ99453 314 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 FTHL17Q9BXU8 183 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 TLE6Q9H808 572 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 GIMAP2Q9UG22 337 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 CACNA1FO60840 1977 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 DLG5Q8TDM6 1919 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 EGFRP00533 1210 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 GLDCP23378 1020 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 ITPKAP23677 461 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 DGKQP52824 942 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 TAF1CQ15572 869 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 WSCD2Q2TBF2 565 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 SDHAF4Q5VUM1 108 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 SULT1C3Q6IMI6 304 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 ZNF613Q6PF04 617 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 DOK6Q6PKX4 331 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 PHC2Q8IXK0 858 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 ZC3H3Q8IXZ2 948 aaKnown RBP12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 CEP295NLQ96MC4 621 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 CGREF1Q99674 301 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 RNF181Q9P0P0 153 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 HTR3EA5X5Y0 456 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 GPR25O00155 361 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 IRF6O14896 467 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 PLSCR1O15162 318 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 BMP7P18075 431 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 CCNCP24863 283 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 PSMA3P25788 255 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 VARSP26640 1264 aaKnown RBP12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 WEE1P30291 646 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 HOXD12P35452 270 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 GNG2P59768 71 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 DCDC1P59894 354 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 ERVK-8P63133 956 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 RHAGQ02094 409 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 TCEAL1Q15170 157 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 CYP2A13Q16696 494 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 DEFB132Q7Z7B7 95 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 SLC15A4Q8N697 577 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 USP7Q93009 1102 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 ITPAQ9BY32 194 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 C11orf16Q9NQ32 467 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 EIF3KQ9UBQ5 218 aaKnown RBP12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 HMGXB4Q9UGU5 601 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 CPA4Q9UI42 421 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 SPACA6W5XKT8 324 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 IGSF6O95976 241 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 AHSGP02765 367 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 DPEP1P16444 411 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 ARL2P36404 184 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 ADCYAP1R1P41586 468 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 GRM5P41594 1212 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 ARSFP54793 590 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 MVKQ03426 396 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 MTAPQ13126 283 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 C9orf57Q5W0N0 161 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 PRR23BQ6ZRT6 265 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 KRT77Q7Z794 578 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 CAND1Q86VP6 1230 aaKnown RBP12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 ZC3HC1Q86WB0 502 aaKnown RBP12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 C11orf65Q8NCR3 313 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 OR10Q1Q8NGQ4 319 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 LMO3Q8TAP4 145 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 MRPS31Q92665 395 aaKnown RBP12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 HEPHQ9BQS7 1158 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 TMEM246Q9BRR3 403 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 CIPCQ9C0C6 399 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 TBC1D17Q9HA65 648 aa12.25□□□□□ -0.45
CSPG4P13-202ENST00000567704 H7C4K7 107 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 SERPINB7O75635 380 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 STK16O75716 305 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 PGK1P00558 417 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 ASPAP45381 313 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 ALDH7A1P49419 539 aaKnown RBP12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 CLCN2P51788 898 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 HERVK_113P63132 956 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 GPAT3Q53EU6 434 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 INTS6LQ5JSJ4 861 aaKnown RBP12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 SLC2A7Q6PXP3 512 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 UGT2A3Q6UWM9 527 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 PHACTR4Q8IZ21 702 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 HERPUD2Q9BSE4 406 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 ERVK-6Q9BXR3 956 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 GPR88Q9GZN0 384 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 DPEP3Q9H4B8 488 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 GOT2P00505 430 aaKnown RBP12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 HPGDP15428 266 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 GLUD2P49448 558 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 NDUFV1P49821 464 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 ABRQ12979 859 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 PABPC1LQ4VXU2 614 aaKnown RBP12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 BRMS1LQ5PSV4 323 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 FAM171A1Q5VUB5 890 aa12.24□□□□□ -0.45
CSPG4P13-202ENST00000567704 KIAA0930Q6ICG6 404 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms