RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ALDH3A1P30838 453 aa18.43■□□□□ 0.54
COMMD4-213ENST00000565834 NUDT1P36639 197 aa18.43■□□□□ 0.54
COMMD4-213ENST00000565834 CLDN2P57739 230 aa18.43■□□□□ 0.54
COMMD4-213ENST00000565834 HSPA14Q0VDF9 509 aa18.43■□□□□ 0.54
COMMD4-213ENST00000565834 CRTC3Q6UUV7 619 aa18.43■□□□□ 0.54
COMMD4-213ENST00000565834 PIWIL4Q7Z3Z4 852 aaKnown RBP18.43■□□□□ 0.54
COMMD4-213ENST00000565834 C10orf107Q8IVU9 208 aa18.43■□□□□ 0.54
COMMD4-213ENST00000565834 TRIM42Q8IWZ5 723 aa18.43■□□□□ 0.54
COMMD4-213ENST00000565834 ASZ1Q8WWH4 475 aa18.43■□□□□ 0.54
COMMD4-213ENST00000565834 BIRC7Q96CA5 298 aa18.43■□□□□ 0.54
COMMD4-213ENST00000565834 FAM126AQ9BYI3 521 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-213ENST00000565834 SPATA6Q9NWH7 488 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-213ENST00000565834 SIRPGQ9P1W8 387 aa18.43■□□□□ 0.54
COMMD4-213ENST00000565834 CCDC189A1A4V9 331 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 POM121BA6NF01 834 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 CHUKO15111 745 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 NUAK1O60285 661 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 GSTM1P09488 218 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 TAC1P20366 129 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 BGNP21810 368 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 GSTM4Q03013 218 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 GBX1Q14549 363 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 OR4D1Q15615 310 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 TSNQ15631 228 aaKnown RBP18.42■□□□□ 0.54
COMMD4-213ENST00000565834 SYTL3Q4VX76 610 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 ZNF547Q8IVP9 402 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.42■□□□□ 0.54
COMMD4-213ENST00000565834 STAG3L4Q8TBR4 150 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 SREK1Q8WXA9 508 aaKnown RBP18.42■□□□□ 0.54
COMMD4-213ENST00000565834 ZNF75CPQ92670 426 aaPredicted RBP18.42■□□□□ 0.54
COMMD4-213ENST00000565834 SPACA7Q96KW9 195 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 MANSC1Q9H8J5 431 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 EBF2Q9HAK2 575 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 FAM8A1Q9UBU6 413 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 IKZF3Q9UKT9 509 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 DMTF1Q9Y222 760 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 CA5BQ9Y2D0 317 aa18.42■□□□□ 0.54
COMMD4-213ENST00000565834 TMEM202A6NGA9 273 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 TCP11X1B4DZS4 312 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 PRAMEF26H0Y7S4 382 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 CDC7O00311 574 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 KERAO60938 352 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 HOXC4P09017 264 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-213ENST00000565834 KIAA1024LP59773 190 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 RGS9BPQ6ZS82 235 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 LRRTM4Q86VH4 590 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 PPP1R14CQ8TAE6 165 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 TMEM159Q96B96 161 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 LINC00615Q96LM1 132 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-213ENST00000565834 PCED1AQ9H1Q7 454 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 RNF112Q9ULX5 631 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 INVSQ9Y283 1065 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-213ENST00000565834 HS3ST3A1Q9Y663 406 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 CEP192Q8TEP8 1941 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 GPC4O75487 556 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 ATP5F1P24539 256 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-213ENST00000565834 KCNC1P48547 511 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 CHI3L2Q15782 390 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 USP39Q53GS9 565 aaKnown RBP18.41■□□□□ 0.54
COMMD4-213ENST00000565834 GCNT7Q6ZNI0 430 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 ADAMTSL2Q86TH1 951 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 TMEM145Q8NBT3 493 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 RAB3IL1Q8TBN0 382 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 SNX19Q92543 992 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 EXT2Q93063 718 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 BMFQ96LC9 184 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 ATOH8Q96SQ7 321 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 OXSMQ9NWU1 459 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 PSD3Q9NYI0 1048 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 SLC17A4Q9Y2C5 497 aa18.41■□□□□ 0.54
COMMD4-213ENST00000565834 C17orf113A0A1B0GUU1 675 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 SRRM3A6NNA2 597 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-213ENST00000565834 SYCE1LA8MT33 242 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 H0Y8X5 98 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 LIN7AO14910 233 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-213ENST00000565834 GRID2O43424 1007 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 DLX3O60479 287 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 SMIM24O75264 130 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 POP7O75817 140 aaKnown RBP18.4■□□□□ 0.54
COMMD4-213ENST00000565834 SLCO2B1O94956 709 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 VIMP08670 466 aaKnown RBP18.4■□□□□ 0.54
COMMD4-213ENST00000565834 MPC1LP0DKB6 136 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 NFATC4Q14934 902 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 PLA2G4EQ3MJ16 856 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 CYHR1Q6ZMK1 362 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 SKA2Q8WVK7 121 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-213ENST00000565834 GLMNQ92990 594 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 CCDC126Q96EE4 140 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 CHMP6Q96FZ7 201 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 RMI1Q9H9A7 625 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 ZNHIT2Q9UHR6 403 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 CDYLQ9Y232 598 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 PRKAB1Q9Y478 270 aa18.4■□□□□ 0.54
COMMD4-213ENST00000565834 DNMT3AQ9Y6K1 912 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-213ENST00000565834 A0A1W2PPC4 97 aa18.39■□□□□ 0.53
COMMD4-213ENST00000565834 SLC5A10A0PJK1 596 aa18.39■□□□□ 0.53
COMMD4-213ENST00000565834 GMNCA6NCL1 334 aa18.39■□□□□ 0.53
COMMD4-213ENST00000565834 MGAT4DA6NG13 374 aa18.39■□□□□ 0.53
COMMD4-213ENST00000565834 TMEM221A6NGB7 291 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms