RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.53■■□□□ 1.68
NME3-208ENST00000565379 FBXO5Q9UKT4 447 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 PCDHB1Q9Y5F3 818 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 CSNK1G3Q9Y6M4 447 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 V9GYY5 206 aaPredicted RBP25.53■■□□□ 1.68
NME3-208ENST00000565379 NEMP2A6NFY4 417 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 CKMT2P17540 419 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 VSNL1P62760 191 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 TEDDM1Q5T9Z0 273 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 HES3Q5TGS1 186 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 TMEM220Q6QAJ8 160 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 SLC26A11Q86WA9 606 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 TRAPPC5Q8IUR0 188 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 C2CD4AQ8NCU7 369 aaPredicted RBP25.52■■□□□ 1.68
NME3-208ENST00000565379 OR4C6Q8NH72 309 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 LINC00615Q96LM1 132 aaPredicted RBP25.52■■□□□ 1.68
NME3-208ENST00000565379 TIMM29Q9BSF4 260 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 TSSK1BQ9BXA7 367 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 GSDMCQ9BYG8 508 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 CDC42EP4Q9H3Q1 356 aaKnown RBP25.52■■□□□ 1.68
NME3-208ENST00000565379 NINJ2Q9NZG7 142 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 IL1RAPL1Q9NZN1 696 aa25.52■■□□□ 1.68
NME3-208ENST00000565379 URB1O60287 2271 aaKnown RBP25.52■■□□□ 1.68
NME3-208ENST00000565379 LY6G6EA0A0G2JKS1 128 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 TCRBV9S1A1TA0A576 114 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 H3BMM5 538 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 FUCA1P04066 466 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 OR56A5P0C7T3 313 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 VCLP18206 1134 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 SLC1A2P43004 574 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 LEPRP48357 1165 aaKnown RBP25.51■■□□□ 1.67
NME3-208ENST00000565379 PRLHRP49683 370 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 ILF3Q12906 894 aaKnown RBP eCLIP25.51■■□□□ 1.67
NME3-208ENST00000565379 NAB1Q13506 487 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 KYNUQ16719 465 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 TRMT10BQ6PF06 316 aaKnown RBP25.51■■□□□ 1.67
NME3-208ENST00000565379 UNC5BQ8IZJ1 945 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 BOCQ9BWV1 1114 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 FUT8Q9BYC5 575 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 PARD6BQ9BYG5 372 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 GNPTGQ9UJJ9 305 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 RAB21Q9UL25 225 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 COMMD10Q9Y6G5 202 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 U3KQA8 63 aa25.51■■□□□ 1.67
NME3-208ENST00000565379 AQP9O43315 295 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 S1PR4O95977 384 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 FTH1P02794 183 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 ESR1P03372 595 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 CLCNKAP51800 687 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 PMS2P54278 862 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 CYP4F3Q08477 520 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 CTBP1Q13363 440 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 PRRT3Q5FWE3 981 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 LVRNQ6Q4G3 990 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 CAPN12Q6ZSI9 719 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 LDB1Q86U70 411 aaPredicted RBP25.5■■□□□ 1.67
NME3-208ENST00000565379 GKN2Q86XP6 184 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 ZNF548Q8NEK5 533 aaPredicted RBP25.5■■□□□ 1.67
NME3-208ENST00000565379 GPBAR1Q8TDU6 330 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 LPGAT1Q92604 370 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 SGF29Q96ES7 293 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 RAXQ9Y2V3 346 aa25.5■■□□□ 1.67
NME3-208ENST00000565379 FASNP49327 2511 aaKnown RBP25.5■■□□□ 1.67
NME3-208ENST00000565379 C17orf113A0A1B0GUU1 675 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 FAM159BA6NKW6 160 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 OR2AG2A6NM03 316 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 MYBL2P10244 700 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 EMBQ6PCB8 327 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 DET1Q7L5Y6 550 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 TMPRSS12Q86WS5 348 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 ZNF547Q8IVP9 402 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 DENND6AQ8IWF6 608 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 LRRC61Q9BV99 259 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 TXLNGYQ9BZA5 131 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 TMEM168Q9H0V1 697 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 P2RY12Q9H244 342 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 CORO1CQ9ULV4 474 aaPredicted RBP25.49■■□□□ 1.67
NME3-208ENST00000565379 ASXL3Q9C0F0 2248 aa25.49■■□□□ 1.67
NME3-208ENST00000565379 TPP1O14773 563 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 OR1I1O60431 355 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 FAM153BP0C7A2 387 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 ACP1P24666 158 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 CTSCP53634 463 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 TARDBPQ13148 414 aaKnown RBP eCLIP25.48■■□□□ 1.67
NME3-208ENST00000565379 COL28A1Q2UY09 1125 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 FAM153CQ494X1 144 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 KCTD16Q68DU8 428 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 CRTC3Q6UUV7 619 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 MICALCLQ6ZW33 695 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 CHST15Q7LFX5 561 aaPredicted RBP25.48■■□□□ 1.67
NME3-208ENST00000565379 AMZ2Q86W34 360 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 LMX1AQ8TE12 382 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 FBF1Q8TES7 1133 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 APOLD1Q96LR9 279 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 PANX3Q96QZ0 392 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 CCM2Q9BSQ5 444 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 CCDC68Q9H2F9 335 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 TXNDC16Q9P2K2 825 aa25.48■■□□□ 1.67
NME3-208ENST00000565379 UBA6A0AVT1 1052 aaPredicted RBP25.47■■□□□ 1.67
NME3-208ENST00000565379 MGAT4DA6NG13 374 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms