RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ABCC6O95255 1503 aa4□□□□□ -1.77
CHD9-212ENST00000564641 ACEP12821 1306 aa4□□□□□ -1.77
CHD9-212ENST00000564641 PHRF1Q9P1Y6 1649 aaKnown RBP4□□□□□ -1.77
CHD9-212ENST00000564641 CCDC196A0A1B0GTZ2 297 aa4□□□□□ -1.77
CHD9-212ENST00000564641 HHLA1C9JL84 531 aa4□□□□□ -1.77
CHD9-212ENST00000564641 F5H0A9 414 aaPredicted RBP4□□□□□ -1.77
CHD9-212ENST00000564641 PSMD14O00487 310 aa4□□□□□ -1.77
CHD9-212ENST00000564641 EXTL3O43909 919 aa4□□□□□ -1.77
CHD9-212ENST00000564641 FRAT2O75474 233 aaPredicted RBP4□□□□□ -1.77
CHD9-212ENST00000564641 PDE9AO76083 593 aa4□□□□□ -1.77
CHD9-212ENST00000564641 CSF2RAP15509 400 aa4□□□□□ -1.77
CHD9-212ENST00000564641 NR2C2P49116 596 aa4□□□□□ -1.77
CHD9-212ENST00000564641 MAD2L1Q13257 205 aaPredicted RBP4□□□□□ -1.77
CHD9-212ENST00000564641 WDR38Q5JTN6 314 aa4□□□□□ -1.77
CHD9-212ENST00000564641 MAATS1Q7Z4T9 603 aa4□□□□□ -1.77
CHD9-212ENST00000564641 PCYOX1LQ8NBM8 494 aa4□□□□□ -1.77
CHD9-212ENST00000564641 RDM1Q8NG50 284 aa4□□□□□ -1.77
CHD9-212ENST00000564641 SLC38A5Q8WUX1 472 aa4□□□□□ -1.77
CHD9-212ENST00000564641 SNRNP27Q8WVK2 155 aaKnown RBP4□□□□□ -1.77
CHD9-212ENST00000564641 TMEM190Q8WZ59 177 aa4□□□□□ -1.77
CHD9-212ENST00000564641 GRAMD2BQ96HH9 432 aa4□□□□□ -1.77
CHD9-212ENST00000564641 ABHD8Q96I13 439 aa4□□□□□ -1.77
CHD9-212ENST00000564641 PCGF1Q9BSM1 259 aa4□□□□□ -1.77
CHD9-212ENST00000564641 PRKRIP1Q9H875 184 aaPredicted RBP4□□□□□ -1.77
CHD9-212ENST00000564641 JMJD4Q9H9V9 463 aa4□□□□□ -1.77
CHD9-212ENST00000564641 ASAH2Q9NR71 780 aa4□□□□□ -1.77
CHD9-212ENST00000564641 TCP11L1Q9NUJ3 509 aa4□□□□□ -1.77
CHD9-212ENST00000564641 C2orf42Q9NWW7 574 aa4□□□□□ -1.77
CHD9-212ENST00000564641 KLHL20Q9Y2M5 609 aa4□□□□□ -1.77
CHD9-212ENST00000564641 PPIP5K1Q6PFW1 1433 aa4□□□□□ -1.77
CHD9-212ENST00000564641 TAF1P21675 1872 aa4□□□□□ -1.77
CHD9-212ENST00000564641 QRICH2Q9H0J4 1663 aa4□□□□□ -1.77
CHD9-212ENST00000564641 TNS1Q9HBL0 1735 aaKnown RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 PARP4Q9UKK3 1724 aaKnown RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 BCL9O00512 1426 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 SERINC4A6NH21 518 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 B4E171 279 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 EIF3DO15371 548 aaKnown RBP eCLIP3.99□□□□□ -1.77
CHD9-212ENST00000564641 KCNN4O15554 427 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 BUD23O43709 281 aaKnown RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 CTSVO60911 334 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 BAIAP3O94812 1187 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 MBD4O95243 580 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 DDX58O95786 925 aaKnown RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 LDHCP07864 332 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 PRSS56P0CW18 603 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 NR1D1P20393 614 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 CAPN3P20807 821 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 TNFAIP3P21580 790 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 ELF1P32519 619 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 CPOXP36551 454 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 UBA7P41226 1012 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 TSPAN7P41732 249 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 ARCN1P48444 511 aaKnown RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 GNB1P62873 340 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 ACVR2BQ13705 512 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 C18orf63Q68DL7 685 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 FAAH2Q6GMR7 532 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 ZNF280DQ6N043 979 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 MZT2BQ6NZ67 158 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 GSTA5Q7RTV2 222 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 HAPLN4Q86UW8 402 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 NRROSQ86YC3 692 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 APLFQ8IW19 511 aaPredicted RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 FAM9BQ8IZU0 186 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 SRBD1Q8N5C6 995 aaKnown RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 ESX1Q8N693 406 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 TSPYL6Q8N831 410 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 MAPK1IP1LQ8NDC0 245 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 TRIM58Q8NG06 486 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 WDR20Q8TBZ3 569 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 APBB2Q92870 758 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 ANKRD9Q96BM1 317 aaPredicted RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 ARHGEF26Q96DR7 871 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 ZBTB10Q96DT7 871 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 PABPC5Q96DU9 382 aaKnown RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 KIF1BPQ96EK5 621 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 APOPT1Q96IL0 206 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 PCYT2Q99447 389 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 GLIS2Q9BZE0 524 aaPredicted RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 CHMP4BQ9H444 224 aaKnown RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 GGA3Q9NZ52 723 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 MARCH4Q9P2E8 410 aaPredicted RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 C2CD2Q9Y426 696 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 ROCK2O75116 1388 aaKnown RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 GREB1LQ9C091 1923 aaPredicted RBP3.99□□□□□ -1.77
CHD9-212ENST00000564641 AKAP12Q02952 1782 aa3.99□□□□□ -1.77
CHD9-212ENST00000564641 COL5A2P05997 1499 aaPredicted RBP3.98□□□□□ -1.77
CHD9-212ENST00000564641 ZBED9Q6R2W3 1325 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 USP6P35125 1406 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 TOPAZ1Q8N9V7 1692 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 ANKRD66B4E2M5 251 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 VCYO14598 125 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 XBP1P17861 261 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 HOXC8P31273 242 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 ABCD1P33897 745 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 LUMP51884 338 aaPredicted RBP3.98□□□□□ -1.77
CHD9-212ENST00000564641 G3BP1Q13283 466 aaKnown RBP eCLIP3.98□□□□□ -1.77
CHD9-212ENST00000564641 BAK1Q16611 211 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 SLC9B1Q4ZJI4 515 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms