RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 OOSP2Q86WS3 158 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 KMT5CQ86Y97 462 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 TMEM126BQ8IUX1 230 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 MR1Q95460 341 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 CCDC42Q96M95 316 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 RUFY1Q96T51 708 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 FSD1LQ9BXM9 530 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 GPR87Q9BY21 358 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 LRRC4CQ9HCJ2 640 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 ACSS2Q9NR19 701 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 HRASLS2Q9NWW9 162 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 SOHLH2Q9NX45 425 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.7□□□□□ -0.38
SF3B3-202ENST00000562722 HACD3Q9P035 362 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 RELNP78509 3460 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 LOC285095A0A1B0GVY8 99 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 SSU72P8A0A1W2PR75 194 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 CLEC18AA5D8T8 446 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 OR5K3A6NET4 321 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 ARGFXA6NJG6 315 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 CST8O60676 142 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 RECKO95980 971 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 PDGFAP04085 211 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 PECAM1P16284 738 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-202ENST00000562722 PTPN4P29074 926 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 CD68P34810 354 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-202ENST00000562722 SLC1A1P43005 524 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 TUBB4BP68371 445 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 DMPKQ09013 629 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 WASHC5Q12768 1159 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 CHAF1BQ13112 559 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 SEMA5AQ13591 1074 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 TUBB2AQ13885 445 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 TRIM14Q14142 442 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 GSE1Q14687 1217 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 GPR19Q15760 415 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 UGT8Q16880 541 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 ASTE1Q2TB18 679 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-202ENST00000562722 TMTC4Q5T4D3 741 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 CPZQ66K79 652 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 DUS1LQ6P1R4 473 aaKnown RBP12.69□□□□□ -0.38
SF3B3-202ENST00000562722 KDELC1Q6UW63 502 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 CLEC18BQ6UXF7 455 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 PID1Q7Z2X4 250 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 SYVN1Q86TM6 617 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 ZC3H18Q86VM9 953 aaKnown RBP12.69□□□□□ -0.38
SF3B3-202ENST00000562722 APLFQ8IW19 511 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-202ENST00000562722 BEND7Q8N7W2 519 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-202ENST00000562722 CLEC18CQ8NCF0 446 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 DDHD1Q8NEL9 900 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 THAP4Q8WY91 577 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 P3H4Q92791 437 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 HAUS1Q96CS2 278 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 C12orf66Q96MD2 445 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 FCRL4Q96PJ5 515 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 CD180Q99467 661 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 DNAJC7Q99615 494 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 SLC25A23Q9BV35 468 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 TUBB2BQ9BVA1 445 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 TRIM55Q9BYV6 548 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 WWP1Q9H0M0 922 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 IL17CQ9P0M4 197 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 RSPH14Q9UHP6 348 aa12.69□□□□□ -0.38
SF3B3-202ENST00000562722 COL12A1Q99715 3063 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 SPENQ96T58 3664 aaKnown RBP12.68□□□□□ -0.38
SF3B3-202ENST00000562722 OR6C74A6NCV1 312 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 STX7O15400 261 aaKnown RBP12.68□□□□□ -0.38
SF3B3-202ENST00000562722 AGFG2O95081 481 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 PRAMEF1O95521 474 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 ZBTB11O95625 1053 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-202ENST00000562722 EPOP01588 193 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 SLC35G4P0C7Q5 338 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 HLA-DPA1P20036 260 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 COMTP21964 271 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 CDKN2BP42772 138 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 ARCN1P48444 511 aaKnown RBP12.68□□□□□ -0.38
SF3B3-202ENST00000562722 CD97P48960 835 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 CCL11P51671 97 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 SLC1A5Q15758 541 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 C4orf17Q53FE4 359 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 CCDC50Q8IVM0 306 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 CPT1CQ8TCG5 803 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 DTX3LQ8TDB6 740 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 OXNAD1Q96HP4 312 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-202ENST00000562722 MRGPRX2Q96LB1 330 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 AKIRIN1Q9H9L7 192 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-202ENST00000562722 FANCEQ9HB96 536 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 KCND1Q9NSA2 647 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 SEMA5BQ9P283 1151 aa12.68□□□□□ -0.38
SF3B3-202ENST00000562722 FARSAQ9Y285 508 aaKnown RBP12.68□□□□□ -0.38
SF3B3-202ENST00000562722 DNMT3AQ9Y6K1 912 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-202ENST00000562722 DDX3YO15523 660 aaKnown RBP12.67□□□□□ -0.38
SF3B3-202ENST00000562722 CBFA2T2O43439 604 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 KLK3P07288 261 aaPredicted RBP12.67□□□□□ -0.38
SF3B3-202ENST00000562722 GNLYP22749 145 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 CA5AP35218 305 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 UQCRFS1P47985 274 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 PRKAA1Q13131 559 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 MPP3Q13368 585 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 IL10RAQ13651 578 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms