RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CES5AQ6NT32 575 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 ERAP2Q6P179 960 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 EPGNQ6UW88 154 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 CYHR1Q6ZMK1 362 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 FRMD7Q6ZUT3 714 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 TAS2R42Q7RTR8 314 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 PIWIL4Q7Z3Z4 852 aaKnown RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 KRT77Q7Z794 578 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 TTC7BQ86TV6 843 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 ALYREFQ86V81 257 aaKnown RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 TREML1Q86YW5 311 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 RASGRP3Q8IV61 690 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 RBFAQ8N0V3 343 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 CPA6Q8N4T0 437 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 NKAPQ8N5F7 415 aaKnown RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 ZNF366Q8N895 744 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 GBP7Q8N8V2 638 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 SIDT2Q8NBJ9 832 aaKnown RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 TMIEQ8NEW7 156 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 PPP1R14CQ8TAE6 165 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 EZH1Q92800 747 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 FUBP1Q96AE4 644 aaKnown RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 ARRDC3Q96B67 414 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 SLC7A6OSQ96CW6 309 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 SGF29Q96ES7 293 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 PTCD3Q96EY7 689 aaKnown RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 COQ10AQ96MF6 247 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 TSNARE1Q96NA8 513 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 LRRC37BQ96QE4 947 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 KXD1Q9BQD3 176 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 C1QTNF3Q9BXJ4 246 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 NMUR2Q9GZQ4 415 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 STN1Q9H668 368 aaKnown RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 ASB8Q9H765 288 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 SYTL2Q9HCH5 934 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 FBRSL1Q9HCM7 1045 aaKnown RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 SAR1AQ9NR31 198 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 THG1LQ9NWX6 298 aaKnown RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 DNAJC28Q9NX36 388 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 ZDHHC3Q9NYG2 299 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 GTSE1Q9NYZ3 720 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 EPS15L1Q9UBC2 864 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 MARCOQ9UEW3 520 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 SUN2Q9UH99 717 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 ZDHHC2Q9UIJ5 367 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 MBD1Q9UIS9 605 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-210ENST00000561817 FAM50BQ9Y247 325 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 RAP2CQ9Y3L5 183 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 PCDHB1Q9Y5F3 818 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 AK5Q9Y6K8 562 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 CKAP5Q14008 2032 aa6.45□□□□□ -1.38
CAPN3-210ENST00000561817 TICRRQ7Z2Z1 1910 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 LRRC14BA6NHZ5 514 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 F8W8V4 182 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 UBXN8O00124 270 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 MYO1CO00159 1063 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 CDC7O00311 574 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 UBFD1O14562 309 aaKnown RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 MSTNO14793 375 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 PFDN6O15212 129 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 VPS26AO75436 327 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 SNUPNO95149 360 aaKnown RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 UNC5CO95185 931 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 KAT7O95251 611 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 HSPA4LO95757 839 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 JUNP05412 331 aaKnown RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 PYGLP06737 847 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 THBS1P07996 1170 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 KITP10721 976 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 CYP2A6P11509 494 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 HNRNPLP14866 589 aaKnown RBP eCLIP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 ZNF7P17097 686 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 ITGB7P26010 798 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 NNMTP40261 264 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 IL12RB1P42701 662 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 MTHFRP42898 656 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 RECQLP46063 649 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 HK2P52789 917 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 ASPHQ12797 758 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 PRKAA1Q13131 559 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 SMAD4Q13485 552 aaKnown RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 SQSTM1Q13501 440 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 HTR4Q13639 388 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 TSNQ15631 228 aaKnown RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 PPP1R3AQ16821 1122 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 AAK1Q2M2I8 961 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 PLA2G4EQ3MJ16 856 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 ZNF658BQ4V348 819 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 KHDC1Q4VXA5 237 aaKnown RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 SLC9B1Q4ZJI4 515 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 HENMT1Q5T8I9 393 aaKnown RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 VWA5B1Q5TIE3 1220 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 ZDHHC20Q5W0Z9 365 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 KLC3Q6P597 504 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 SBSNQ6UWP8 590 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 LIPIQ6XZB0 460 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 Q6ZVL8 140 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 SLC22A9Q8IVM8 553 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 CPNE9Q8IYJ1 553 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms