RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZCWPW2A0A1B0GU75 182 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 IQCF5A8MTL0 148 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 CD3EAPO15446 510 aaKnown RBP13.61□□□□□ -0.23
TPM1-230ENST00000561266 MLNP12872 115 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 PAFAH1B1P43034 410 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 GPR3P46089 330 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 RPL21P46778 160 aaKnown RBP13.61□□□□□ -0.23
TPM1-230ENST00000561266 PREPP48147 710 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 DR1Q01658 176 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 LAMB3Q13751 1172 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 ITIH4Q14624 930 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 ANKRD20A4Q4UJ75 823 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 ZNF789Q5FWF6 425 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 CAPRIN2Q6IMN6 1127 aaKnown RBP13.61□□□□□ -0.23
TPM1-230ENST00000561266 PACS1Q6VY07 963 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 SLC9B2Q86UD5 537 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 KDF1Q8NAX2 398 aaPredicted RBP13.61□□□□□ -0.23
TPM1-230ENST00000561266 SPATA4Q8NEY3 305 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 PEX13Q92968 403 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 ZNF514Q96K75 400 aaPredicted RBP13.61□□□□□ -0.23
TPM1-230ENST00000561266 CCM2Q9BSQ5 444 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 TRIM31Q9BZY9 425 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 COG4Q9H9E3 785 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 CATSPERZQ9NTU4 200 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 KCNK4Q9NYG8 393 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 SATB2Q9UPW6 733 aa13.61□□□□□ -0.23
TPM1-230ENST00000561266 URB1O60287 2271 aaKnown RBP13.61□□□□□ -0.23
TPM1-230ENST00000561266 ZZEF1O43149 2961 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 IGHV5-10-1A0A0J9YXX1 117 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 SDR42E2A6NKP2 422 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 OR5K4A6NMS3 321 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 CCDC188H7C350 402 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 RAD51CO43502 376 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 TLX3O43711 291 aaPredicted RBP13.6□□□□□ -0.23
TPM1-230ENST00000561266 KCNJ13O60928 360 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 HGFP14210 728 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 ITGB6P18564 788 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 NSG1P42857 185 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 DHX9Q08211 1270 aaKnown RBP13.6□□□□□ -0.23
TPM1-230ENST00000561266 SQSTM1Q13501 440 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 GPR18Q14330 331 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 C16orf72Q14CZ0 275 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 BRD3Q15059 726 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 TRADDQ15628 312 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 FASTKD1Q53R41 847 aaKnown RBP13.6□□□□□ -0.23
TPM1-230ENST00000561266 C3orf38Q5JPI3 329 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 HP1BP3Q5SSJ5 553 aaPredicted RBP13.6□□□□□ -0.23
TPM1-230ENST00000561266 HIBCHQ6NVY1 386 aaPredicted RBP13.6□□□□□ -0.23
TPM1-230ENST00000561266 CASC4Q6P4E1 433 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 TMEM26Q6ZUK4 368 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 TMEM135Q86UB9 458 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 KRT222Q8N1A0 295 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 RCBTB1Q8NDN9 531 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 HEXDCQ8WVB3 486 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 ZCCHC14Q8WYQ9 949 aaKnown RBP13.6□□□□□ -0.23
TPM1-230ENST00000561266 ZNF669Q96BR6 464 aaPredicted RBP13.6□□□□□ -0.23
TPM1-230ENST00000561266 SLC38A3Q99624 504 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 NRSN2Q9GZP1 204 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 P2RY12Q9H244 342 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 OR52A5Q9H2C5 316 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 EPB41L5Q9HCM4 733 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 XAB2Q9HCS7 855 aaKnown RBP13.6□□□□□ -0.23
TPM1-230ENST00000561266 RNF14Q9UBS8 474 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 ZMIZ1Q9ULJ6 1067 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 EPG5Q9HCE0 2579 aa13.6□□□□□ -0.23
TPM1-230ENST00000561266 ZFHX4Q86UP3 3567 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 ADAMTS20P59510 1910 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 C17orf113A0A1B0GUU1 675 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 FAM237BA0A1B0GVD1 139 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 CFAP99D6REC4 459 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 AP3B1O00203 1094 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 BRINP1O60477 761 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 CPNE6O95741 557 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 VIPP01282 170 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 RALBP11234 206 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 MTHFD1P11586 935 aaKnown RBP13.59□□□□□ -0.23
TPM1-230ENST00000561266 TYRP1P17643 537 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 VCLP18206 1134 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 CCKBRP32239 447 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 CCR7P32248 378 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 ETV5P41161 510 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 MAPK9P45984 424 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 ITGA8P53708 1063 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 INHBCP55103 352 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 PPP1CAP62136 330 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 GABREP78334 506 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 SARNPP82979 210 aaKnown RBP13.59□□□□□ -0.23
TPM1-230ENST00000561266 BIRC2Q13490 618 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 MAP9Q49MG5 647 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 CTSL3PQ5NE16 218 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 KIAA0930Q6ICG6 404 aaPredicted RBP13.59□□□□□ -0.23
TPM1-230ENST00000561266 CENPUQ71F23 418 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 PIM3Q86V86 326 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 VRK3Q8IV63 474 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 PHC3Q8NDX5 983 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 WDR48Q8TAF3 677 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 HM13Q8TCT9 377 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 CCDC74BQ96LY2 380 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 C12orf66Q96MD2 445 aa13.59□□□□□ -0.23
TPM1-230ENST00000561266 CCDC86Q9H6F5 360 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms