RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 STRA8Q7Z7C7 330 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 SERPINA9Q86WD7 417 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 HEATR4Q86WZ0 1026 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 HORMAD1Q86X24 394 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 CILP2Q8IUL8 1156 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 TMEFF1Q8IYR6 380 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 IQCKQ8N0W5 287 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 KRT222Q8N1A0 295 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 CBARPQ8N350 705 aaPredicted RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 SYNPOQ8N3V7 929 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 SPATA6LQ8N4H0 392 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 TP53I13Q8NBR0 393 aaPredicted RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 OR4L1Q8NH43 312 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 STK35Q8TDR2 534 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 HCAR2Q8TDS4 363 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 SLC44A1Q8WWI5 657 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.16□□□□□ -1.58
SPG11-220ENST00000559933 LPGAT1Q92604 370 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 ARL8AQ96BM9 186 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 AP2M1Q96CW1 435 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 ELMO2Q96JJ3 720 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 SERAC1Q96JX3 654 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 SLC6A18Q96N87 628 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 FAM167BQ9BTA0 163 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 DHRS4Q9BTZ2 278 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 LGR4Q9BXB1 951 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 BTBD1Q9H0C5 482 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 C12orf65Q9H3J6 166 aaKnown RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 FAM83DQ9H4H8 585 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 ASB8Q9H765 288 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 FBRSQ9HAH7 460 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 FSCN3Q9NQT6 498 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 ITM2CQ9NQX7 267 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 CATSPERZQ9NTU4 200 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 WSB2Q9NYS7 404 aaPredicted RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 MOCS1Q9NZB8 636 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 PKD2L2Q9NZM6 624 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 HACD3Q9P035 362 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 CRLS1Q9UJA2 301 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 FBXO5Q9UKT4 447 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 CNOT6Q9ULM6 557 aaKnown RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 PNMA8BQ9ULN7 279 aaPredicted RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 FZD4Q9ULV1 537 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 NCKAP1Q9Y2A7 1128 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 CRYL1Q9Y2S2 319 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 TMEM98Q9Y2Y6 226 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 MTO1Q9Y2Z2 717 aaKnown RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 PRKAB1Q9Y478 270 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 BAHCC1Q9P281 2608 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 TRPM6Q9BX84 2022 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 A0A1W2PPM1 405 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 A0A1W2PQ67 120 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 POM121BA6NF01 834 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 TMEM202A6NGA9 273 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 OR2AG2A6NM03 316 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 TRIM49D1C9J1S8 452 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 H0Y858 1186 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 H7C0S8 307 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 GOLGA8RI6L899 631 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 AP3B1O00203 1094 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 TPP1O14773 563 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PHGDHO43175 533 aaKnown RBP5.15□□□□□ -1.59
SPG11-220ENST00000559933 SLC7A4O43246 635 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 LAMTOR5O43504 91 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 LATO43561 262 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 TSPAN6O43657 245 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 SGTAO43765 313 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 NIPSNAP2O75323 286 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 TM7SF2O76062 418 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 IGLV3-19P01714 112 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 AHSGP02765 367 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 TUBBP07437 444 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PAMP19021 973 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 ITGALP20701 1170 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PSMA3P25788 255 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 ACRV1P26436 265 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PBLDP30039 288 aaPredicted RBP5.15□□□□□ -1.59
SPG11-220ENST00000559933 FMO4P31512 558 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 AKT1P31749 480 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PHBP35232 272 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PTGER3P43115 390 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 MSH2P43246 934 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 GPR1P46091 355 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 POLD2P49005 469 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 CCR3P51677 355 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 CTSCP53634 463 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 LIMK2P53671 638 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 CSE1LP55060 971 aaKnown RBP5.15□□□□□ -1.59
SPG11-220ENST00000559933 CDKN2DP55273 166 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 DCDC1P59894 354 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 TIAL1Q01085 375 aaKnown RBP eCLIP5.15□□□□□ -1.59
SPG11-220ENST00000559933 ZBTB16Q05516 673 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 CACNG1Q06432 222 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 INPP5AQ14642 412 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 LPAL2Q16609 132 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 TYSND1Q2T9J0 566 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 KLHL38Q2WGJ6 581 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 SETMARQ53H47 684 aaPredicted RBP5.15□□□□□ -1.59
SPG11-220ENST00000559933 FASTKD1Q53R41 847 aaKnown RBP5.15□□□□□ -1.59
SPG11-220ENST00000559933 PPM1JQ5JR12 505 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms