RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 NELL1Q92832 810 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 LINGO1Q96FE5 620 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 PDXPQ96GD0 296 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 APOPT1Q96IL0 206 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 SCYL1Q96KG9 808 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 PKNOX2Q96KN3 472 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 IQCGQ9H095 443 aaKnown RBP10.26□□□□□ -0.77
TPM1-221ENST00000559831 RMI1Q9H9A7 625 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 SYTL2Q9HCH5 934 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 TM7SF3Q9NS93 570 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 GPR34Q9UPC5 381 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 RUVBL2Q9Y230 463 aaKnown RBP10.26□□□□□ -0.77
TPM1-221ENST00000559831 ANKRD6Q9Y2G4 727 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 DNAJC16Q9Y2G8 782 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 ACTL7BQ9Y614 415 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 ADAMTS9Q9P2N4 1935 aa10.26□□□□□ -0.77
TPM1-221ENST00000559831 A0A1W2PR77 199 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 KPNA5O15131 536 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 BCAT2O15382 392 aaPredicted RBP10.25□□□□□ -0.77
TPM1-221ENST00000559831 GLRA3O75311 464 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 WISP3O95389 354 aaPredicted RBP10.25□□□□□ -0.77
TPM1-221ENST00000559831 FUCA1P04066 466 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 APOA4P06727 396 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 LTA4HP09960 611 aaKnown RBP10.25□□□□□ -0.77
TPM1-221ENST00000559831 ZNF37AP17032 561 aaPredicted RBP10.25□□□□□ -0.77
TPM1-221ENST00000559831 CD9P21926 228 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 DGKAP23743 735 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 OAS2P29728 719 aaKnown RBP10.25□□□□□ -0.77
TPM1-221ENST00000559831 PREPP48147 710 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 GLRBP48167 497 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 RGS4P49798 205 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 CSRP3P50461 194 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 C21orf59P57076 290 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 SRP54P61011 504 aaKnown RBP10.25□□□□□ -0.77
TPM1-221ENST00000559831 DLG1Q12959 904 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 EIF2B5Q13144 721 aaKnown RBP10.25□□□□□ -0.77
TPM1-221ENST00000559831 LPAL2Q16609 132 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 ALG11Q2TAA5 492 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 PYCR3Q53H96 274 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 ZNF542PQ5EBM4 170 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 ACSBG2Q5FVE4 666 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 C16orf46Q6P387 395 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 SH2D5Q6ZV89 423 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 CCDC91Q7Z6B0 441 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 AMZ2Q86W34 360 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 CFAP206Q8IYR0 622 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 NKAPQ8N5F7 415 aaKnown RBP10.25□□□□□ -0.77
TPM1-221ENST00000559831 LILRA3Q8N6C8 439 aaPredicted RBP10.25□□□□□ -0.77
TPM1-221ENST00000559831 ANKRD42Q8N9B4 389 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 BANPQ8N9N5 519 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 HM13Q8TCT9 377 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 EEF1AKMT1Q8WVE0 214 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 SKA2Q8WVK7 121 aaPredicted RBP10.25□□□□□ -0.77
TPM1-221ENST00000559831 ANKRD49Q8WVL7 239 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 PIGKQ92643 395 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 TMEM159Q96B96 161 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 ALKBH8Q96BT7 664 aaKnown RBP10.25□□□□□ -0.77
TPM1-221ENST00000559831 NXNL1Q96CM4 212 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 OR2M4Q96R27 311 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 OSGEPL1Q9H4B0 414 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 IGSF5Q9NSI5 407 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 KLC4Q9NSK0 619 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 ZNF358Q9NW07 568 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 PLEKHM1Q9Y4G2 1056 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 PCDHGA2Q9Y5H1 932 aa10.25□□□□□ -0.77
TPM1-221ENST00000559831 ZNF318Q5VUA4 2279 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 BPTFQ12830 3046 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 A0A0C4DFX4 3053 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 SPTY2D1-AS1A0A0U1RR47 76 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 A0A1B0GTW7 788 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 TMEM120BA0PK00 339 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 NPEPPSL1A6NEC2 478 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 MGAT4DA6NG13 374 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 TLR4O00206 839 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 TNFRSF10CO14798 259 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 KLHL2O95198 593 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 TNFP01375 233 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 GSTA1P08263 222 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 GSTM1P09488 218 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 GNSP15586 552 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 VCLP18206 1134 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 NR1D1P20393 614 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 CRHR1P34998 444 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 RPA3P35244 121 aaPredicted RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 CCT5P48643 541 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 CSNK1EP49674 416 aaKnown RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 AFF3P51826 1226 aaKnown RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 IL2P60568 153 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 PPP2R2AP63151 447 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 IRX4P78413 519 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 ARHGAP8P85298 464 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 GSTM4Q03013 218 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 FZD2Q14332 565 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 NFE2L1Q14494 772 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 TEAD4Q15561 434 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 SEPT7Q16181 437 aaKnown RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 FAM83EQ2M2I3 478 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 PLEKHS1Q5SXH7 462 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 N4BP2L1Q5TBK1 243 aaPredicted RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 AGAP9Q5VTM2 703 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms