RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 NDNQ99608 321 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 ACSS3Q9H6R3 686 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 C17orf113A0A1B0GUU1 675 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 KLHL33A6NCF5 533 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 PDZK1P1A8MUH7 402 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 E5RI56 91 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 GSTM1P09488 218 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 CD59P13987 128 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 IDSP22304 550 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 CLCNKAP51800 687 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 GSTM4Q03013 218 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 DMPKQ09013 629 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 NAB1Q13506 487 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 BOP1Q14137 746 aaKnown RBP20.88■□□□□ 0.93
CASC4-204ENST00000557945 BRD3Q15059 726 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 SYTL3Q4VX76 610 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 LVRNQ6Q4G3 990 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 NAPRTQ6XQN6 538 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 FAM83HQ6ZRV2 1179 aaPredicted RBP20.88■□□□□ 0.93
CASC4-204ENST00000557945 GPATCH11Q8N954 259 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 CPNE1Q99829 537 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 AARSD1Q9BTE6 412 aaKnown RBP20.88■□□□□ 0.93
CASC4-204ENST00000557945 FUT8Q9BYC5 575 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 SARS2Q9NP81 518 aaKnown RBP20.88■□□□□ 0.93
CASC4-204ENST00000557945 SPATS2LQ9NUQ6 558 aaKnown RBP20.88■□□□□ 0.93
CASC4-204ENST00000557945 NLGN3Q9NZ94 848 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 SIRPGQ9P1W8 387 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 TBC1D29Q9UFV1 150 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 COMMD10Q9Y6G5 202 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 GVINP1Q7Z2Y8 2422 aa20.88■□□□□ 0.93
CASC4-204ENST00000557945 B4DGG1 531 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 TRIM38O00635 465 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 TPP1O14773 563 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 FLRT2O43155 660 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 ABHD2P08910 425 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 RPL10P27635 214 aaKnown RBP20.87■□□□□ 0.93
CASC4-204ENST00000557945 GP5P40197 560 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 GRK6P43250 576 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 CSE1LP55060 971 aaKnown RBP20.87■□□□□ 0.93
CASC4-204ENST00000557945 SLC29A2Q14542 456 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 UAP1Q16222 522 aaPredicted RBP20.87■□□□□ 0.93
CASC4-204ENST00000557945 ZC3HC1Q86WB0 502 aaKnown RBP20.87■□□□□ 0.93
CASC4-204ENST00000557945 LILRA3Q8N6C8 439 aaPredicted RBP20.87■□□□□ 0.93
CASC4-204ENST00000557945 OR4C6Q8NH72 309 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 DUSP23Q9BVJ7 150 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 COG4Q9H9E3 785 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 PRDM8Q9NQV8 689 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 GULP1Q9UBP9 304 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 BTBD3Q9Y2F9 522 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 PIKFYVEQ9Y2I7 2098 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 LAMA1P25391 3075 aa20.87■□□□□ 0.93
CASC4-204ENST00000557945 FAM155BO75949 473 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 GIMD1P0DJR0 217 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 CCR7P32248 378 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 PLA2G5P39877 138 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 TMED2Q15363 201 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 KLHL38Q2WGJ6 581 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 MAP9Q49MG5 647 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 RBM20Q5T481 1227 aaKnown RBP20.86■□□□□ 0.93
CASC4-204ENST00000557945 METRNLQ641Q3 311 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 OTOAQ7RTW8 1153 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 RHBDD1Q8TEB9 315 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 ZDHHC1Q8WTX9 485 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 CAVIN3Q969G5 261 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 RHOJQ9H4E5 214 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 CORO1CQ9ULV4 474 aaPredicted RBP20.86■□□□□ 0.93
CASC4-204ENST00000557945 WDR87Q6ZQQ6 2873 aa20.86■□□□□ 0.93
CASC4-204ENST00000557945 TRBV23OR9-2A0A075B6M9 112 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 SIGLEC6O43699 453 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 SH3BP5O60239 455 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 EML2O95834 649 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 APOA4P06727 396 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 SAT1P21673 171 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 PREPP48147 710 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 LIMK1P53667 647 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 C6orf132Q5T0Z8 1188 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 GRTP1Q5TC63 336 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 DBX2Q6ZNG2 339 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 ALYREFQ86V81 257 aaKnown RBP20.85■□□□□ 0.93
CASC4-204ENST00000557945 NAXDQ8IW45 347 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 NETO1Q8TDF5 533 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 KCNJ9Q92806 393 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 ELMO2Q96JJ3 720 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 EPB41L4BQ9H329 900 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 ACSL5Q9ULC5 683 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 PSMD13Q9UNM6 376 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 ASCC3Q8N3C0 2202 aaKnown RBP20.85■□□□□ 0.93
CASC4-204ENST00000557945 EXOC1LA0A1B0GW35 172 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 PRR19A6NJB7 356 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 POC1B-GALNT4F8VUJ3 575 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 LIN7AO14910 233 aaPredicted RBP20.85■□□□□ 0.93
CASC4-204ENST00000557945 KPNA5O15131 536 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 VPS26AO75436 327 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 SLC35G4P0C7Q5 338 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 AOAHP28039 575 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 HSPA14Q0VDF9 509 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 HECTD2Q5U5R9 776 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 FAM45BPQ6NSW5 357 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 ZCCHC8Q6NZY4 707 aaKnown RBP20.85■□□□□ 0.93
CASC4-204ENST00000557945 SFTPA2Q8IWL1 248 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms