RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ZNF235Q14590 738 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 PIWIL3Q7Z3Z3 882 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 TLK2Q86UE8 772 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 SLCO6A1Q86UG4 719 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 PIK3C3Q8NEB9 887 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 OR2T12Q8NG77 320 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 SLC47A1Q96FL8 570 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 SLC39A13Q96H72 371 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 ZNF583Q96ND8 569 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 ZNF382Q96SR6 550 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 BCL7BQ9BQE9 202 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 AKIP1Q9NQ31 210 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 CD274Q9NZQ7 290 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 MTRRQ9UBK8 725 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 EIF2B4Q9UI10 523 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 ST3GAL5Q9UNP4 418 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 SLC27A5Q9Y2P5 690 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 FAM92AA1XBS5 289 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 ZNF99A8MXY4 864 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 M0QZ92 97 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 PDHXO00330 501 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 SLC1A7O00341 560 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 RAMP2O60895 175 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 XYLBO75191 536 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 VPS26AO75436 327 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 GJB3O75712 270 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 DDNO94850 711 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 G6PDP11413 515 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 PIGAP37287 484 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 IST1P53990 364 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 CTF1Q16619 201 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 DPY19L1Q2PZI1 675 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 PERM1Q5SV97 790 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 AFTPHQ6ULP2 937 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 CYP20A1Q6UW02 462 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 ENPP6Q6UWR7 440 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 GPSM1Q86YR5 675 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 VMP1Q96GC9 406 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 ZNF641Q96N77 438 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 CCDC90BQ9GZT6 254 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 CARS2Q9HA77 564 aaKnown RBP11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 NLE1Q9NVX2 485 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 LIMD1Q9UGP4 676 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 ADGRE2Q9UHX3 823 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 C3orf18Q9UK00 162 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 NAALAD2Q9Y3Q0 740 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 LOC100130705A0A1B0GUX0 176 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 HTR3EA5X5Y0 456 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 E2F3O00716 465 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 MGEA5O60502 916 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 INMTO95050 263 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 SERPINF2P08697 491 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 AGXTP21549 392 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 ARL1P40616 181 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 DGKQP52824 942 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 GP2P55259 537 aaKnown RBP11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 SERINC3Q13530 473 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 PARP15Q460N3 678 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 SPESP1Q6UW49 350 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 IL27RAQ6UWB1 636 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 AGMOQ6ZNB7 445 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 BTLAQ7Z6A9 289 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 DEFB132Q7Z7B7 95 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 SCN4BQ8IWT1 228 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 FAM86B1Q8N7N1 296 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 ATP6V0D2Q8N8Y2 350 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 OR7A2PQ8NGA2 310 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 METTL6Q8TCB7 284 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 ESAMQ96AP7 390 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 ACTR8Q9H981 624 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 LTB4R2Q9NPC1 389 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 TRMT6Q9UJA5 497 aaKnown RBP11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 ST14Q9Y5Y6 855 aa11.66□□□□□ -0.54
VIPAS39-211ENST00000557658 IGLV3-10A0A075B6K4 115 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 PTGES3LE9PB15 166 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 M0QZQ0 153 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 SLC22A1O15245 554 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 HS6ST1O60243 411 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 NDST3O95803 873 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 MSH3P20585 1137 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 PCMT1P22061 227 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 HOXD12P35452 270 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 ERVPABLB-1P60509 514 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 ISL1P61371 349 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 PLIN5Q00G26 463 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 CACNB2Q08289 660 aaPredicted RBP11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 NR6A1Q15406 480 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 PTPRNQ16849 979 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 CCDC92Q53HC0 331 aaPredicted RBP11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 PRAMEF19Q5SWL8 479 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 RBM23Q86U06 439 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 ADHFE1Q8IWW8 467 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 EID3Q8N140 333 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 DCBLD1Q8N8Z6 715 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 NPLOC4Q8TAT6 608 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 HASPINQ8TF76 798 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 ZBTB18Q99592 522 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 PSD2Q9BQI7 771 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 HEPHQ9BQS7 1158 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 ACTL8Q9H568 366 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms