RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TMEM206Q9H813 350 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 TUFT1Q9NNX1 390 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 SEMA4GQ9NTN9 838 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 DPP3Q9NY33 737 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 RHCGQ9UBD6 479 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 TINAGQ9UJW2 476 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 PACSIN3Q9UKS6 424 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 PADI3Q9ULW8 664 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 COG5Q9UP83 839 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 TMEM184BQ9Y519 407 aaPredicted RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 PCDHGA1Q9Y5H4 931 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 SRPRBQ9Y5M8 271 aaKnown RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 RAI2Q9Y5P3 530 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 KRT87PA6NCN2 255 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 CCDC69A6NI79 296 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 LRRC3CA6NJW4 275 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 YDJCA8MPS7 323 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 HEPACAM2A8MVW5 462 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ZNF814B7Z6K7 855 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 FAM90A26D6RGX4 464 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 I6L893 689 aaPredicted RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 INO80B-WBP1J3KQ70 363 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 CLDN4O14493 209 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ADAM10O14672 748 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 SLC30A4O14863 429 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 WNT9BO14905 357 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 TO15178 435 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ASAP2O43150 1006 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 HSPA12AO43301 675 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 TLX3O43711 291 aaPredicted RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 TLR2O60603 784 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 TSPAN1O60635 241 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ATG13O75143 517 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 PPFIA2O75334 1257 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 MED24O75448 989 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 STAM2O75886 525 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 DDNO94850 711 aaPredicted RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ACSL3O95573 720 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 RAB40ALP0C0E4 278 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 DANCRP0C864 163 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 UROSP10746 265 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 PCP11498 1178 aaKnown RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 CYP19A1P11511 503 aaPredicted RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 GAP43P17677 238 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 CD22P20273 847 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 GNLYP22749 145 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 TKTP29401 623 aaKnown RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 HPDP32754 393 aaPredicted RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 WNT5AP41221 380 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 NT5C2P49902 561 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 SLC12A3P55017 1021 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 PROK1P58294 105 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 CD81P60033 236 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 STX1BP61266 288 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ST8SIA6P61647 398 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 TEFQ10587 303 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 NPRL3Q12980 569 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 CTTNQ14247 550 aaKnown RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 NR1D2Q14995 579 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 SLC39A14Q15043 492 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 DECR1Q16698 335 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 PPP6R3Q5H9R7 873 aaPredicted RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 CEP78Q5JTW2 689 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 OLFML1Q6UWY5 402 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 DEF8Q6ZN54 512 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 BTN2A1Q7KYR7 527 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 KCTD9Q7L273 389 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ATG9AQ7Z3C6 839 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ZC3HC1Q86WB0 502 aaKnown RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 CNGA4Q8IV77 575 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 PM20D2Q8IYS1 436 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ANKRD13CQ8N6S4 541 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 SLC38A9Q8NBW4 561 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ACVR1CQ8NER5 493 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 SEMA6DQ8NFY4 1073 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 C9orf43Q8TAL5 461 aaPredicted RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 UTP15Q8TED0 518 aaKnown RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ATL1Q8WXF7 558 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 NSMAFQ92636 917 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 TAAR8Q969N4 342 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 SLAMF9Q96A28 289 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 BSCL2Q96G97 398 aaPredicted RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 FAM81BQ96LP2 452 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 RUNDC3BQ96NL0 473 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 PKP4Q99569 1192 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 HNRNPABQ99729 332 aaKnown RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 CPNE1Q99829 537 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 KXD1Q9BQD3 176 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 TMEM79Q9BSE2 394 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ZNF747Q9BV97 191 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 GTPBP2Q9BX10 602 aaKnown RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 SPRY4Q9C004 299 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 TNMDQ9H2S6 317 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 FN3KQ9H479 309 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 TASP1Q9H6P5 420 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 MINDY3Q9H8M7 445 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 MYNNQ9NPC7 610 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 DNAJC17Q9NVM6 304 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms