RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 RHOT1Q8IXI2 618 aa10.93□□□□□ -0.66
HNRNPC-231ENST00000557336 RBM12BQ8IXT5 1001 aaKnown RBP10.93□□□□□ -0.66
HNRNPC-231ENST00000557336 ZNF567Q8N184 647 aa10.93□□□□□ -0.66
HNRNPC-231ENST00000557336 DDHD1Q8NEL9 900 aa10.93□□□□□ -0.66
HNRNPC-231ENST00000557336 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.93□□□□□ -0.66
HNRNPC-231ENST00000557336 MAK16Q9BXY0 300 aaKnown RBP10.93□□□□□ -0.66
HNRNPC-231ENST00000557336 NHEJ1Q9H9Q4 299 aaPredicted RBP10.93□□□□□ -0.66
HNRNPC-231ENST00000557336 FAM153AQ9UHL3 310 aa10.93□□□□□ -0.66
HNRNPC-231ENST00000557336 PSMD13Q9UNM6 376 aa10.93□□□□□ -0.66
HNRNPC-231ENST00000557336 PLAAQ9Y263 795 aa10.93□□□□□ -0.66
HNRNPC-231ENST00000557336 PCDHGA6Q9Y5G7 932 aa10.93□□□□□ -0.66
HNRNPC-231ENST00000557336 ZNF106Q9H2Y7 1883 aaKnown RBP10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 ITPR2Q14571 2701 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 CST8O60676 142 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 MFAP3LO75121 409 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 RASSF9O75901 435 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 TNNT1P13805 278 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 NR2C2P49116 596 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 MSLNQ13421 630 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 UBAP2LQ14157 1087 aaKnown RBP10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 NFE2L1Q14494 772 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 SLC1A5Q15758 541 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 LACTB2Q53H82 288 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 METRNLQ641Q3 311 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 IRGCQ6NXR0 463 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 FAM199XQ6PEV8 388 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 FAM151BQ6UXP7 276 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 SPOCD1Q6ZMY3 1216 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 MICALCLQ6ZW33 695 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 AMZ2Q86W34 360 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 VSTM4Q8IW00 320 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 RHOT2Q8IXI1 618 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 SLC25A41Q8N5S1 370 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 BEND7Q8N7W2 519 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 SLC38A9Q8NBW4 561 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 CT55Q8WUE5 264 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 TFB1MQ8WVM0 346 aaKnown RBP10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 MIB2Q96AX9 1013 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 CXorf40BQ96DE9 158 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 ZDHHC12Q96GR4 267 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 PPM1MQ96MI6 270 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 FCRL5Q96RD9 977 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 MAP3K3Q99759 626 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 TRABDQ9H4I3 376 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 C10orf88Q9H8K7 445 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 LHX9Q9NQ69 397 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 DDX56Q9NY93 547 aaKnown RBP10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 ANKMY1Q9P2S6 941 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 TFR2Q9UP52 801 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 KCTD3Q9Y597 815 aa10.92□□□□□ -0.66
HNRNPC-231ENST00000557336 hCG_1818297A0A087WSY0 165 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 OR2AG2A6NM03 316 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 MTSS1O43312 755 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 KATNA1O75449 491 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 CREG1O75629 220 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 RECKO95980 971 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 EBLN1P0CF75 366 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 SPAM1P38567 509 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 SLC1A1P43005 524 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 CD97P48960 835 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 TBX2Q13207 712 aaPredicted RBP10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 OLIG2Q13516 323 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 DNASE1L3Q13609 305 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 KAZNQ674X7 775 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 TCTN3Q6NUS6 607 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 DUS1LQ6P1R4 473 aaKnown RBP10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 TMEM220Q6QAJ8 160 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 ZC3H18Q86VM9 953 aaKnown RBP10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 PPP1R3BQ86XI6 285 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 RASGRP3Q8IV61 690 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 LILRA3Q8N6C8 439 aaPredicted RBP10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 CCDC42Q96M95 316 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 SRPK1Q96SB4 655 aaKnown RBP10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 INSM2Q96T92 566 aaPredicted RBP10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 NRTNQ99748 197 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 TRIM55Q9BYV6 548 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 DEF6Q9H4E7 631 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 SMOXQ9NWM0 555 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 LNPEPQ9UIQ6 1025 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 TLK1Q9UKI8 766 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 PADI1Q9ULC6 663 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 ALG6Q9Y672 507 aa10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 CFAP20Q9Y6A4 193 aaKnown RBP10.91□□□□□ -0.66
HNRNPC-231ENST00000557336 MED13Q9UHV7 2174 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 SPTBP11277 2137 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 GLYATL1P3A0A0U1RQE8 302 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 AGAP14A8MT82 685 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 KCNJ13O60928 360 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 DNAJB5O75953 348 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 AGTP01019 485 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 NTRK1P04629 796 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 MTHFD1P11586 935 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 PMS2P54278 862 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 HADHBP55084 474 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 RPS18P62269 152 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 XIAPP98170 497 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 KLRB1Q12918 225 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 TUBB3Q13509 450 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 TRIM14Q14142 442 aa10.9□□□□□ -0.66
HNRNPC-231ENST00000557336 TFDP2Q14188 446 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms